Datasets:

Liu-Hy
/

GenoTEX

ArXiv:

Liu-Hy commited on Nov 16, 2025

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a89a473

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1 Parent(s): 0854c12

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output/regress/Obstructive_sleep_apnea/significant_genes_condition_Age.json +174 -347
output/regress/Obstructive_sleep_apnea/significant_genes_condition_Anxiety_disorder.json +1171 -333
output/regress/Obstructive_sleep_apnea/significant_genes_condition_Bipolar_disorder.json +1045 -390
output/regress/Obstructive_sleep_apnea/significant_genes_condition_Chronic_kidney_disease.json +0 -0
output/regress/Obstructive_sleep_apnea/significant_genes_condition_Chronic_obstructive_pulmonary_disease_(COPD).json +1050 -395
output/regress/Obstructive_sleep_apnea/significant_genes_condition_Epilepsy.json +171 -344
output/regress/Obstructive_sleep_apnea/significant_genes_condition_Fibromyalgia.json +475 -1464
output/regress/Obstructive_sleep_apnea/significant_genes_condition_Gender.json +1084 -348
output/regress/Obstructive_sleep_apnea/significant_genes_condition_Generalized_Anxiety_Disorder.json +0 -0
output/regress/Obstructive_sleep_apnea/significant_genes_condition_Substance_Use_Disorder.json +1176 -383
output/regress/Osteoarthritis/significant_genes_condition_Age.json +839 -92
output/regress/Osteoarthritis/significant_genes_condition_Arrhythmia.json +49 -58
output/regress/Osteoarthritis/significant_genes_condition_Atherosclerosis.json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Atrial_Fibrillation.json +50 -65
output/regress/Osteoarthritis/significant_genes_condition_Bipolar_disorder.json +50 -62
output/regress/Osteoarthritis/significant_genes_condition_Breast_Cancer.json +48 -54
output/regress/Osteoarthritis/significant_genes_condition_COVID-19.json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Chronic_kidney_disease.json +58 -52
output/regress/Osteoarthritis/significant_genes_condition_Chronic_obstructive_pulmonary_disease_(COPD).json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Coronary_artery_disease.json +56 -56
output/regress/Osteoarthritis/significant_genes_condition_Epilepsy.json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Gender.json +854 -59
output/regress/Osteoarthritis/significant_genes_condition_Huntingtons_Disease.json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Hypertension.json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Insomnia.json +55 -40
output/regress/Osteoarthritis/significant_genes_condition_Liver_Cancer.json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Liver_cirrhosis.json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Migraine.json +67 -52
output/regress/Osteoarthritis/significant_genes_condition_Obesity.json +55 -58
output/regress/Osteoarthritis/significant_genes_condition_Obsessive-Compulsive_Disorder.json +78 -0
output/regress/Osteoarthritis/significant_genes_condition_Obstructive_sleep_apnea.json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Polycystic_Ovary_Syndrome.json +35 -59
output/regress/Osteoarthritis/significant_genes_condition_Post-Traumatic_Stress_Disorder.json +42 -60
output/regress/Osteoarthritis/significant_genes_condition_Psoriasis.json +432 -297
output/regress/Osteoarthritis/significant_genes_condition_Schizophrenia.json +57 -42
output/regress/Osteoarthritis/significant_genes_condition_Stroke.json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Thyroid_Cancer.json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Type_1_Diabetes.json +0 -0
output/regress/Osteoarthritis/significant_genes_condition_Type_2_Diabetes.json +0 -0
output/regress/Osteoporosis/significant_genes_condition_Age.json +0 -0
output/regress/Osteoporosis/significant_genes_condition_Cervical_Cancer.json +0 -0
output/regress/Osteoporosis/significant_genes_condition_Hypertension.json +746 -749
output/regress/Osteoporosis/significant_genes_condition_Liver_Cancer.json +0 -0
output/regress/Osteoporosis/significant_genes_condition_Obesity.json +0 -0
output/regress/Osteoporosis/significant_genes_condition_Sarcoma.json +801 -0
output/regress/Pancreatic_Cancer/significant_genes_condition_Age.json +77 -278
output/regress/Pancreatic_Cancer/significant_genes_condition_Gender.json +86 -959
output/regress/Pancreatic_Cancer/significant_genes_condition_Hypertension.json +576 -555
output/regress/Pancreatic_Cancer/significant_genes_condition_Obesity.json +615 -537
output/regress/Parkinsons_Disease/significant_genes_condition_Age.json +826 -826

output/regress/Obstructive_sleep_apnea/significant_genes_condition_Age.json CHANGED Viewed

@@ -1,363 +1,190 @@
 {
     "significant_genes": {
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     }
 }

 {
     "significant_genes": {
         "Variable": [
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+            0.033693109966266406,
+            0.030750970018243822,
+            0.022982993154129282,
+            0.010503673757972861,
+            0.009470196215854673,
+            0.0027712229936300656,
+            0.002115794300349675
         ]
     },
     "cv_performance": {
         "prediction": {
+            "nmse": 7.134244245871305,
+            "r_squared": -6.1342442458713045
         },
         "selection": {
+            "precision": 0.37735849056603776,
+            "recall": 0.38461538461538464,
+            "f1": 0.380952380952381,
+            "jaccard": 0.19230769230769232
         }
     }
 }

output/regress/Obstructive_sleep_apnea/significant_genes_condition_Anxiety_disorder.json CHANGED Viewed

@@ -1,351 +1,1189 @@
 {
     "significant_genes": {
         "Variable": [
-            "OTC",
-            "COL4A1",
-            "HTN3",
-            "CIDEC",
-            "ALG1L1P",
-            "ESM1",
-            "ZIC2",
-            "CSRNP1",
-            "C14orf180",
-            "PRSS58",
-            "AIM2",
-            "CFAP46",
-            "ADH4",
-            "FAM74A3",
-            "ZNF114",
-            "NRG2",
-            "PLA2G2E",
-            "HOXD11",
-            "CHST2",
-            "NUCB2",
-            "HOXC9",
-            "PRB4",
-            "DIPK1A",
-            "IL17F",
-            "HOXA10",
-            "FOXD2",
-            "E2F7",
-            "THRSP",
-            "SLC35C1",
-            "KRT35",
-            "C4orf50",
-            "GRIN2D",
-            "LINC01599",
-            "TIMP4",
-            "C18orf54",
-            "ODF4",
-            "PLAC1",
-            "MAP4K2",
-            "MMP9",
-            "SHOX2",
-            "IL22",
-            "IL11",
-            "DNMT3B",
-            "CIMIP2B",
-            "GRAP",
-            "FAM43B",
-            "EAF2",
-            "BMF",
-            "CDH24",
-            "C17orf67",
             "ABCG1",
-            "SLC36A1",
-            "RHAG",
-            "GARIN4",
-            "CNR2",
-            "TMEM132A",
-            "FRMPD2B",
-            "PCDH17",
-            "PARP12",
-            "MT1A",
-            "KRTAP13-1",
-            "CXCL13",
-            "HOXC8",
-            "GPRIN1",
-            "KRT32",
-            "H2BC12",
-            "FAAP24",
-            "POTEE",
-            "GPR101",
-            "SHROOM3",
-            "HSD17B13",
-            "HOXC6",
-            "FERD3L",
-            "NETO2",
-            "SLC2A7",
-            "ST6GAL2",
-            "SLC17A3",
-            "LINC00314",
-            "CDC25C",
-            "KCNQ1OT1",
-            "H2AC11",
-            "LEPROTL1",
-            "SKAP2",
-            "CCDC14",
-            "TTR",
-            "CELSR3",
-            "THSD7B",
-            "ZNF707",
-            "SLC5A9",
-            "WIF1",
-            "FCRL2",
-            "CRIPTO",
-            "BLOC1S3",
             "ADAM12",
-            "SLC28A1",
-            "LIPI",
-            "TICAM1",
-            "SEC14L3",
-            "MFAP2",
-            "ARHGAP36",
-            "ARTN",
-            "HTR3B",
-            "DIO1",
-            "CDY1B",
-            "CSRP1",
-            "DPF1",
-            "PDE6A",
-            "SULT1C3",
-            "SMR3B"
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         "Coefficient": [
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-            -8.703975150915072e-05,
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         "Absolute Coefficient": [
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     "cv_performance": {
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         }
     }
 }

 {
     "significant_genes": {
         "Variable": [
+            "A4GALT",
+            "AAK1",
+            "A1CF",
+            "AATF",
+            "ABCC6P2",
+            "A1BG-AS1",
+            "ABCC6",
+            "AASS",
+            "ABCC13",
+            "ABCB4",
+            "ABCC3",
+            "ACSM1",
+            "AAR2",
+            "AANAT",
+            "ABCA6",
+            "ABCD4",
+            "AASDH",
+            "ABCC6P1",
+            "ACAN",
+            "ACBD4",
+            "ABCA8",
+            "ACSF3",
+            "ABCA7",
+            "A2ML1",
+            "ABLIM3",
+            "ABHD15",
+            "ACSM4",
+            "ABCB6",
+            "ACSM5",
+            "AATK",
+            "ABTB3",
+            "ABO",
+            "ABCA5",
+            "ABCB5",
+            "ACP5",
+            "ABHD18",
+            "AADACL2",
+            "ACOD1",
+            "ABCA12",
+            "A1BG",
+            "ACAP3",
+            "ABCA2",
+            "ACOX2",
+            "ACKR1",
+            "ABHD2",
+            "ADA",
+            "ABHD16B",
+            "ABCA10",
+            "ABHD13",
+            "ADCY10",
+            "AACSP1",
+            "ABCC11",
+            "ABCA9",
+            "A4GNT",
+            "ACOT12",
+            "AACS",
+            "ABI3",
+            "ABL2",
+            "AAMDC",
+            "ADAM30",
+            "ABT1",
+            "ABHD14B",
+            "ACER3",
+            "ABCC8",
+            "ADAMTS2",
+            "ABHD4",
+            "ADAM22",
+            "ACTL7A",
+            "ACAA1",
+            "A3GALT2",
             "ABCG1",
+            "AMFR",
+            "ABCB8",
+            "AARS2",
+            "AAA1",
+            "ABCG5",
+            "ABTB1",
+            "AADAT",
+            "ABHD16A",
+            "ACMSD",
+            "ACOT6",
+            "AAGAB",
+            "ABCG8",
+            "ABTB2",
+            "ACOT9",
+            "ACTL6B",
+            "AADACL3",
+            "ACTR2",
+            "ADAMTS19",
+            "ACCS",
+            "ADAM28",
+            "ADAM18",
+            "CABP7",
+            "ADORA1",
+            "ACHE",
+            "ACBD6",
+            "ABCB11",
+            "ADAM11",
+            "ACAP1",
+            "ACER1",
+            "C11orf65",
+            "ACACB",
+            "AKR1C8",
+            "ABHD17A",
+            "ABHD17AP1",
+            "ABHD17B",
+            "ADAM21P1",
+            "ABI2",
+            "ACSL5",
+            "ADAMTSL2",
+            "AGR3",
+            "AGTR2",
+            "CFHR5",
+            "ALKAL2",
+            "AARS1",
+            "ADAMDEC1",
+            "ACAD11",
+            "ACTN4",
+            "ABCF2",
             "ADAM12",
+            "ACTL10",
+            "ABHD11",
+            "ABRACL",
+            "ADGRA1",
+            "ADRB3",
+            "ACAA2",
+            "ABCA1",
+            "AARSD1",
+            "ADAMTS14",
+            "ABHD6",
+            "ADAMTSL3",
+            "AGAP10P",
+            "AGA",
+            "ACSBG1",
+            "ABCC5",
+            "ABCA13",
+            "ADAMTS5",
+            "ADH1C",
+            "ACTR3",
+            "AAMP",
+            "ANXA10",
+            "ADAMTS15",
+            "ADAM32",
+            "ADAMTS7",
+            "AADACL4",
+            "ACRV1",
+            "BBOX1",
+            "ABRA",
+            "ADGRE4P",
+            "ACADS",
+            "ACBD5",
+            "CCDC116",
+            "ADAM3A",
+            "ABCC10",
+            "C2CD4A",
+            "ABHD10",
+            "AAAS",
+            "ABCD3",
+            "ABHD5",
+            "APOF",
+            "ADAMTS3",
+            "ACSS2",
+            "APBA1",
+            "ADCYAP1R1",
+            "ACVR1C",
+            "ABCG2",
+            "ALDH8A1",
+            "AJM1",
+            "ARHGEF28",
+            "ACAP2",
+            "ANTXRL",
+            "ADARB2-AS1",
+            "ALX4",
+            "ANKRD45",
+            "ADAMTS9",
+            "AGO2",
+            "ABCG4",
+            "ADRA1A",
+            "ABHD3",
+            "PRY",
+            "ADCY5",
+            "AFG1L",
+            "CFAP20DC",
+            "AXDND1",
+            "ALS2",
+            "ABI3BP",
+            "ABHD1",
+            "APCS",
+            "MAGEC3",
+            "AFP",
+            "ADGRL3",
+            "ACE2",
+            "ADAMTS4",
+            "ACAT1",
+            "ABCE1",
+            "ANO3",
+            "CHAC1",
+            "AKR1C1",
+            "ACRBP",
+            "AMPD1",
+            "ADAMTSL1",
+            "ADAMTS10",
+            "ATP6V1E1",
+            "ABHD8",
+            "CCDC81",
+            "CCL13",
+            "SNCAIP",
+            "DNASE1L3",
+            "ACSM3",
+            "ADAP2",
+            "HHCM",
+            "ANKRD20A2P",
+            "CELA3B",
+            "ECSCR",
+            "ACBD3",
+            "ADAMTS13",
+            "ABLIM2",
+            "ADH7",
+            "ADA2",
+            "ABRAXAS2",
+            "ANKRD29",
+            "HAMP",
+            "AKR7A2P1",
+            "FTHL17",
+            "CYP2A7",
+            "ACSM2B",
+            "CHRDL1",
+            "AMY1C",
+            "BRD7P3",
+            "ABCA4",
+            "ACTBL2",
+            "AFAP1L2",
+            "AKAP5",
+            "ALX3",
+            "ADRA2B",
+            "USP17L5",
+            "ANKRD1",
+            "CRACR2A",
+            "ANXA13",
+            "ADARB1",
+            "NOVA1",
+            "AKR7L",
+            "CATSPERE",
+            "ABAT",
+            "ARMC2",
+            "PDYN",
+            "MIRLET7C",
+            "ATP7B",
+            "AGPAT1",
+            "ADGRV1",
+            "FZD9",
+            "ADCY7",
+            "ACAT2",
+            "NDP",
+            "HEPN1",
+            "CLDN24",
+            "NPS",
+            "APBA2",
+            "SPATA1",
+            "DYNLT2",
+            "ACY3",
+            "C9orf57",
+            "CCDC144NL",
+            "ACSS3",
+            "AKR1B15",
+            "RHOXF1",
+            "ANKRD20A3P",
+            "ACD",
+            "MIR340",
+            "IFNA17",
+            "AGBL1",
+            "BCAN",
+            "GARNL3",
+            "CARD14",
+            "ATP6V1G2",
+            "ADGRA3",
+            "PON1",
+            "LAMP3",
+            "GLYATL1",
+            "ACVR1",
+            "ABCC1",
+            "CSTL1",
+            "ABI1",
+            "CLVS1",
+            "C1orf159",
+            "ADAT1",
+            "ATR",
+            "BCL2L10",
+            "ARL3",
+            "ALPI",
+            "GCNT2P1",
+            "CAPN13",
+            "LOC645188",
+            "DCX",
+            "ADCK1",
+            "CYP21A2",
+            "AMPD2",
+            "ADAM8",
+            "BHLHE41",
+            "ANKRD35",
+            "KCNH4",
+            "CHRNA4",
+            "GLT6D1",
+            "CNIH3",
+            "BAZ2A",
+            "NPNT",
+            "PCK1",
+            "ACP3",
+            "C8orf17",
+            "ADCY9",
+            "CCDC190",
+            "CBLN2",
+            "ADGRB3",
+            "SPRR2C",
+            "AGXT2",
+            "C8A",
+            "ABCD2",
+            "GPX5",
+            "ATP10A",
+            "ADGRB2",
+            "ALOX15",
+            "BAP1",
+            "ACTA2",
+            "ARHGEF26",
+            "ALPG",
+            "PCDHB7",
+            "C1orf146",
+            "ABCC2",
+            "LOC402279",
+            "ACOXL",
+            "CCL24",
+            "ZNF774",
+            "AGBL2",
+            "FLRT1",
+            "CELP",
+            "AK3",
+            "AFAP1L1",
+            "KCNA6",
+            "GARIN5B",
+            "A2M",
+            "AFTPH",
+            "TTC21B",
+            "C11orf16",
+            "ADGRG6",
+            "ADGRG4",
+            "ADGRA2",
+            "ADAM10",
+            "BAALC",
+            "BSX",
+            "CPA6",
+            "C1QTNF12",
+            "C17orf50",
+            "ANKRD28",
+            "ARL17B",
+            "GGT7",
+            "ANOS1",
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+            "CLEC4M",
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+            "LOC646903",
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+            "ADCK2",
+            "LOC646471",
+            "C1orf141",
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+            "ADRA1B",
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+            "BLOC1S2",
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+            "B3GLCT",
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         "Coefficient": [
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         "Absolute Coefficient": [
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 }

output/regress/Obstructive_sleep_apnea/significant_genes_condition_Bipolar_disorder.json CHANGED Viewed

@@ -1,408 +1,1063 @@
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-            0.001780035741927312,
-            0.0017742054231738799,
-            0.0017296914273692249,
-            0.0016871316961166978,
-            0.0016773870356178782,
-            0.0013914506267394882,
-            0.0013810341642558881,
-            0.001376565132497518,
-            0.00137122361812719,
-            0.0013278482994039187,
-            0.001316910897415022,
-            0.001163286725232816,
-            0.0010447683217884903,
-            0.001021905756320097,
-            0.0009657045303673122,
-            0.0009530269050057934,
-            0.0008767504525545966,
-            0.0008691175494718023,
-            0.000859694369728052,
-            0.0008485061693395394,
-            0.0008243835744127045,
-            0.0008024747780632211,
-            0.0008003784343843693,
-            0.0007929430033625854,
-            0.0007851203663187678,
-            0.0007746313095706945,
-            0.0007579117135945593,
-            0.0007138861540459721,
-            0.0006496193598845017,
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-            0.0006049455250754088,
-            0.0005893891959874038,
-            0.0005569596316649706,
-            0.0005058351231612831,
-            0.00045768560339570216,
-            0.00045659600737641505,
-            0.0004026526166165297,
-            0.0003477904664128092,
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-            0.0002912464037975508,
-            0.0001769978606856398,
-            0.00012996836301259047,
-            2.2349236887546714e-05,
-            7.558676030613087e-06
         ]
     },
     "cv_performance": {
         "prediction": {
-            "accuracy": 99.64601769911505,
-            "precision": 99.6133009527368,
-            "recall": 100.0,
-            "f1": 99.80571078258
         },
         "selection": {
-            "precision": 1.353808993219514,
-            "recall": 3.4615384615384612,
-            "f1": 1.9449248876336171,
-            "jaccard": 0.9824847864334675
         }
     }
 }

 {
     "significant_genes": {
         "Variable": [
+            "A1CF",
+            "ABCC6P2",
+            "ABCC6",
+            "AATF",
+            "AADACL2",
+            "AAA1",
+            "AACSP1",
+            "AAK1",
+            "AASS",
+            "ACSM4",
+            "ABCA8",
+            "ABHD15",
+            "ABCC13",
+            "ABCA7",
+            "ACKR1",
+            "ABCA10",
+            "ABHD13",
+            "ABCC6P1",
+            "AAR2",
+            "ABCD4",
+            "ACOD1",
+            "ACSF3",
+            "AASDH",
+            "ACAN",
+            "A3GALT2",
+            "ABHD18",
+            "ACP5",
+            "ACBD4",
+            "ABCA5",
+            "AAMDC",
+            "ADAM30",
+            "A1BG-AS1",
+            "ADAMTS2",
+            "ABCB4",
+            "ADA",
+            "ABHD2",
+            "ABHD17A",
+            "AATK",
+            "ACSM5",
+            "ABLIM3",
+            "ABCA12",
+            "A4GALT",
+            "ADCY10",
+            "ABO",
+            "ABL2",
+            "AADAT",
+            "ABCA9",
+            "ABTB3",
+            "AANAT",
+            "ABI3",
+            "ACSM1",
+            "ABCA6",
+            "AACS",
+            "ABCB11",
+            "ABCC8",
+            "ACOX2",
+            "ABCE1",
+            "ABCC5",
+            "ACER3",
+            "ABCC3",
+            "AAMP",
             "ABCG1",
+            "ABCG8",
+            "ABCB8",
+            "AARS2",
+            "ACAP3",
+            "ACTL7A",
+            "ABTB1",
+            "ACBD5",
+            "AADACL3",
+            "ABCC9",
+            "ABT1",
+            "ADAM21P1",
+            "ADAM11",
+            "ABCA2",
+            "AMFR",
+            "ADAMDEC1",
+            "ADH1C",
+            "ACE2",
+            "ACE",
+            "ACSM2B",
+            "ABCG4",
+            "ADCYAP1R1",
+            "ADAMTS4",
+            "ADORA1",
+            "C11orf65",
+            "ABHD16B",
+            "ACOT6",
+            "ABCB6",
+            "AFF2",
+            "ACSM6",
+            "ALDH8A1",
+            "ABHD10",
+            "ABHD4",
+            "ACMSD",
+            "ACOT12",
+            "ABHD12",
+            "ABHD14B",
+            "ACTR2",
+            "ABCG5",
+            "ALX3",
+            "ACOT8",
+            "ACBD6",
+            "ABRA",
+            "ADAMTS7",
+            "ABCC4",
+            "ADGRE4P",
+            "ARGFXP2",
+            "ACOT9",
+            "ABI3BP",
+            "ANXA10",
+            "ADAMTS17",
+            "ADAMTS15",
+            "ABCF2",
+            "ADAMTS19",
+            "ADAM18",
+            "ABCC11",
+            "ANKIB1",
+            "AGR3",
+            "ADAM3A",
+            "ADRA2B",
+            "ABHD17AP1",
+            "AKAP1",
+            "ADAM12",
+            "ADAM28",
+            "ADAMTS10",
+            "DCX",
+            "ADGRE1",
+            "ABCD3",
+            "ADAM22",
+            "ABCA3",
+            "ACAT1",
+            "A1BG",
+            "ADARB2-AS1",
+            "AARSD1",
+            "ABCC2",
+            "ACAA2",
+            "BCO2",
+            "ABCG2",
+            "BARHL1",
+            "ACRV1",
+            "GLB1L3",
+            "AGPAT1",
+            "ACAT2",
+            "ABCD1",
+            "ALG12",
+            "BAAT",
+            "CCDC116",
+            "AKR7A2P1",
+            "ABTB2",
+            "APBA3",
+            "AGA",
+            "ADI1",
+            "EPPIN",
+            "ACD",
+            "ABHD5",
+            "AKR1C8",
+            "ARL5B",
+            "ADAMTS14",
+            "AFDN-DT",
+            "ADGRA1",
+            "HHCM",
+            "ACTL7B",
+            "AHRR",
+            "AHSG",
+            "ADD2",
+            "GCNT2P1",
+            "ACOXL",
+            "ADAMTSL2",
+            "ANXA13",
+            "ALPK2",
+            "CLEC4M",
+            "AFAP1",
+            "ACSBG2",
+            "CDH4",
+            "C2CD4A",
+            "AGBL1",
+            "ABHD1",
+            "ARL6",
+            "AGTR2",
+            "ACVR2B",
+            "C14orf180",
+            "ETAA1",
+            "ADGRF1",
+            "ADA2",
+            "AFMID",
+            "AAAS",
+            "AFP",
+            "APOF",
+            "ADGRV1",
+            "ABHD17B",
+            "AGO2",
+            "AFTPH",
+            "MIR580",
+            "BMP8A",
+            "ACTB",
+            "AJM1",
+            "AMPD1",
+            "CCK",
+            "ABCF3",
+            "ARL3",
+            "MIR340",
+            "A2ML1",
+            "ACTN3",
+            "FAM171B",
+            "ATP13A2",
+            "ACAP2",
+            "ADAMTS5",
+            "CPA6",
+            "ACAA1",
+            "BSPH1",
+            "ADH7",
+            "CLCA3P",
+            "TAAR5",
+            "SNCAIP",
+            "CABP7",
+            "AMER2",
+            "CTHRC1",
+            "ASB17",
+            "LOC643381",
+            "ABHD16A",
+            "OR10G4",
+            "CASR",
+            "MIR888",
+            "ACTL6B",
+            "AKAP14",
+            "CLIC6",
+            "OR52B4",
+            "DEFB103A",
+            "CDHR1",
+            "ABCC1",
+            "PSG7",
+            "CYP2W1",
+            "AIPL1",
+            "ACSM3",
+            "MIRLET7C",
+            "TBX18",
+            "CYP21A2",
+            "ABCB9",
+            "ACER1",
+            "ANKMY1",
+            "AFAP1L2",
+            "CCAR1",
+            "PDYN",
+            "CCN4",
+            "LIAT1",
+            "AASDHPPT",
+            "ACTN4",
+            "FNDC4",
+            "PCK1",
+            "TAS2R9",
+            "GOLGA7B",
+            "H4C13",
+            "DNASE1L3",
+            "ACOT11",
+            "BHLHE23",
+            "ACVR1",
+            "EMID1",
+            "ARHGAP1",
+            "AGBL2",
+            "AARS1",
+            "COL11A1",
+            "AKAP5",
+            "ACP6",
+            "ASCL5",
+            "CCDC144NL",
+            "ADGRE2",
+            "ACER2",
+            "CAPN12",
             "ALG11",
+            "ADPRH",
+            "GPX5",
+            "B3GNT7",
+            "ACYP1",
+            "CLRN1",
+            "ALKAL2",
+            "CAPN6",
+            "AIFM3",
+            "ACSL6",
+            "KNG1",
+            "CLDN18",
+            "CSAG3",
+            "OR5B17",
+            "FLJ42393",
+            "DIRC1",
+            "C5",
+            "AHCYL2",
+            "USP17L5",
+            "ABCA4",
+            "LIPK",
+            "ACP3",
+            "AEN",
+            "CCL23",
+            "ABI1",
+            "ALPG",
+            "AGTRAP",
+            "GLT6D1",
+            "C22orf31",
+            "CLGN",
+            "ACTR8",
+            "ABCB5",
+            "PLSCR5",
+            "PCDHB7",
+            "CYP2A7",
+            "ADAM17",
+            "HRH3",
+            "CCNI2",
+            "CORO2A",
+            "ASB8",
+            "ADPRM",
+            "KCNH2",
+            "RIPPLY2",
+            "ANTXRL",
+            "FNDC11",
+            "EXD3",
+            "ACKR3",
+            "C19orf18",
+            "CCDC54",
+            "ABCB1",
+            "CT47A6",
+            "CACNG6",
+            "CYP26A1",
+            "ADAT1",
+            "CIMIP5",
+            "CCDC26",
+            "ADCK2",
+            "ADRM1",
+            "SMAD2",
+            "ADAM6",
+            "OR6C3",
+            "ACTR6",
+            "NXF2B",
+            "CA3",
+            "KLB",
+            "COX8C",
+            "ADAM2",
+            "CLDN10",
+            "CIDEB",
+            "EMX2",
+            "ADGRF2P",
+            "CCL11",
+            "ERBB3",
+            "GJA4",
+            "EBF4",
+            "OR10S1",
+            "AGAP9",
+            "CABP1"
         ],
         "Coefficient": [
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     "cv_performance": {
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         "selection": {
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         }
     }
 }

output/regress/Obstructive_sleep_apnea/significant_genes_condition_Chronic_kidney_disease.json CHANGED Viewed

The diff for this file is too large to render. See raw diff

output/regress/Obstructive_sleep_apnea/significant_genes_condition_Chronic_obstructive_pulmonary_disease_(COPD).json CHANGED Viewed

@@ -1,414 +1,1069 @@
 {
     "significant_genes": {
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-            6.164439786127875e-05,
-            3.479976895198882e-05,
-            2.9947807948228476e-05
         ],
         "Absolute Coefficient": [
-            0.02051125875148306,
-            0.02020642529272062,
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     },
     "cv_performance": {
         "prediction": {
-            "accuracy": 99.29203539823008,
-            "precision": 99.23763957707541,
-            "recall": 100.0,
-            "f1": 99.61699374686172
         },
         "selection": {
-            "precision": 1.1472992677195155,
             "recall": 2.6923076923076925,
-            "f1": 1.6074567434492883,
-            "jaccard": 0.8112542422325472
         }
     }
 }

 {
     "significant_genes": {
         "Variable": [
+            "AAK1",
+            "A1BG-AS1",
+            "A4GALT",
+            "AATF",
+            "ABCC6",
+            "AAR2",
+            "ABCC6P2",
+            "ABCC3",
+            "AASS",
+            "ABCA8",
+            "ABCB4",
+            "A1CF",
+            "ABCC13",
+            "ABCA6",
+            "ACSF3",
+            "ABCA5",
+            "ABHD15",
+            "AASDH",
+            "ABO",
+            "ABCC6P1",
+            "ABHD13",
+            "ABT1",
+            "A3GALT2",
+            "AATK",
+            "ACOX2",
+            "ACSM4",
+            "ACAN",
+            "A4GNT",
+            "ABCA7",
+            "ABLIM3",
+            "ACBD4",
+            "ABCA10",
+            "ACSM1",
+            "ABCA12",
+            "ABTB3",
+            "ACAP3",
+            "ACP5",
+            "ABHD2",
+            "ABHD16B",
+            "ABL2",
+            "ABCB5",
+            "ACSM5",
+            "AACSP1",
+            "AANAT",
+            "ABCA2",
+            "ACKR1",
+            "ABHD18",
+            "ABCC11",
+            "ABCC8",
+            "ABCB11",
+            "AACS",
+            "ACOD1",
+            "ADAMTS2",
+            "ABCB6",
+            "ABCD4",
+            "ADAM30",
             "ABCG1",
+            "ACTL7A",
+            "ADA",
+            "ADCY10",
+            "ABCG4",
+            "AMFR",
+            "ABCG8",
+            "ABHD4",
+            "ABI3",
+            "ACER3",
+            "ADAM22",
+            "AARS2",
+            "AAA1",
+            "ABHD16A",
+            "ACOT12",
+            "ACMSD",
+            "ADAMTS19",
+            "ABCA9",
+            "ABCG5",
+            "ABTB1",
+            "AAGAB",
+            "ACAD11",
+            "ACTL6B",
+            "ABCE1",
+            "ACBD6",
+            "AASDHPPT",
+            "CABP7",
             "ABHD14B",
+            "ABCB8",
+            "A1BG",
+            "ACOT9",
+            "ADAM12",
+            "A2ML1",
+            "ABCC4",
+            "ADAMTSL2",
+            "ABCC5",
+            "AADAT",
+            "ACOT6",
+            "AGTR2",
+            "ACAA1",
+            "AGR3",
+            "ADAM18",
+            "ADAM11",
+            "ACACB",
+            "ABRACL",
+            "ACTR2",
+            "ACTL10",
+            "ACCS",
+            "AJM1",
+            "ALKAL2",
+            "ADAMTS14",
+            "ADAMTS4",
+            "ADGRA1",
+            "CFHR5",
+            "ACE2",
+            "ALX4",
+            "ACSS2",
+            "AAMDC",
+            "ACSM3",
+            "AADACL4",
+            "C11orf65",
+            "ABTB2",
+            "ACRV1",
+            "ACER1",
+            "AAMP",
+            "ANTXRL",
+            "APCS",
+            "ADCYAP1R1",
+            "AFG1L",
+            "ADGRL3",
+            "DCX",
+            "ADAMTS13",
+            "BBOX1",
+            "ABCC1",
+            "ACHE",
+            "ABHD6",
+            "ABCA1",
+            "AFTPH",
+            "ADAM28",
+            "ADAMTS7",
+            "ABI2",
+            "CCDC116",
+            "APOF",
+            "AKAP5",
+            "ACSBG1",
+            "ABRA",
+            "AGPAT1",
+            "ACRBP",
+            "ATP7B",
+            "ADAMTS5",
+            "ACTBL2",
+            "ADAMTS18",
+            "C11orf16",
+            "AGA",
+            "ECSCR",
+            "AKAP1",
+            "ABCF3",
+            "AADACL2",
+            "C2CD4A",
+            "ADIPOQ",
+            "ADH7",
+            "AAAS",
+            "ANXA10",
+            "AMY1C",
+            "ADAM21P1",
+            "CHAC1",
+            "ABLIM2",
+            "ADAMDEC1",
+            "ADGRA3",
+            "ALDH8A1",
+            "ADPRH",
+            "AMPD1",
+            "ANO3",
+            "ACSS3",
+            "KCNH4",
+            "AXDND1",
+            "ARL13A",
+            "AKR1C8",
+            "AFP",
+            "ARHGAP24",
+            "ANKRD45",
+            "ADAM3A",
+            "AFG2A",
+            "ADCY7",
+            "ABHD12",
+            "ABCB7",
+            "ABHD11",
+            "ABHD3",
+            "CCDC190",
+            "ACSL5",
+            "ADGRG4",
+            "ATP6V1E1",
+            "SNCAIP",
+            "CARD14",
+            "BRD7P3",
+            "ARHGEF10",
+            "NPS",
+            "CRACR2A",
+            "CELA3B",
+            "SPATA1",
+            "ADCK1",
+            "HEPN1",
+            "ACTB",
+            "B3GNT7",
+            "ARHGEF28",
+            "AARS1",
+            "DNASE1L3",
+            "FTHL17",
+            "ABHD12B",
+            "PDYN",
+            "ABHD14A",
+            "CELP",
+            "ADCY1",
+            "CHST4",
+            "CLCA3P",
+            "AKR7A2P1",
+            "ACD",
+            "CLEC4M",
+            "ACOXL",
+            "CPLX2",
+            "CCL13",
+            "CHRDL1",
+            "ALX3",
+            "ADAMTS17",
+            "GPR32",
+            "RHOXF1",
+            "CCDC81",
+            "C1orf159",
+            "ACADM",
+            "ADRA2B",
+            "ATP6V0A4",
+            "AARSD1",
+            "MIRLET7C",
+            "CAPN13",
+            "ABHD17B",
+            "ABCG2",
+            "ARMCX5",
+            "MAGEC3",
+            "ADARB1",
+            "B3GLCT",
+            "SYT14P1",
+            "ACKR4",
+            "CFAP20DC",
+            "USP17L5",
+            "CEACAM20",
+            "DUX5",
+            "CTNNA3",
+            "AGO2",
+            "BCL2L10",
+            "ABHD1",
+            "ABCB1",
+            "PRY",
+            "ACBD3",
+            "KCNA6",
+            "BSX",
+            "ABCD2",
+            "ADAM10",
+            "ARHGEF26",
+            "GALNT17",
+            "ALB",
+            "GLB1L3",
+            "EFNA5",
+            "FZD9",
+            "ANKRD29",
+            "ADCY9",
+            "ABCC2",
+            "TTC21B",
+            "ADAMTS10",
+            "CCDC144NL",
+            "ADAM21",
+            "ADGRB3",
+            "CYP17A1",
+            "DYNLT2",
+            "DEFB103B",
+            "ANGPT2",
+            "ADGRB2",
+            "EMID1",
+            "AGXT2",
+            "ANKRD46",
+            "AMPD2",
+            "BPIFA4P",
+            "ACTR3",
+            "ALDOB",
+            "C8A",
+            "GARIN5B",
+            "CD164",
+            "TSPEAR",
+            "ADARB2-AS1",
+            "ACTA2",
+            "ACAP2",
+            "FLRT1",
+            "CBY2",
+            "ANKAR",
+            "AFAP1L1",
+            "ATP13A4",
+            "LGALS13",
+            "CALHM6",
+            "AGAP10P",
+            "AHRR",
+            "C7",
+            "ADGRF1",
+            "ADAMTS9",
+            "ELN",
+            "ASCL4",
+            "AIPL1",
+            "MIR1276",
+            "ANXA13",
+            "AWAT1",
+            "MEG3",
+            "GCNT2P1",
+            "CBARP",
+            "BAGE3",
+            "BCL6B",
+            "GAS2",
+            "AHCYL2",
+            "BRIP1",
+            "HAR1A",
+            "NOVA1",
+            "ASAH2B",
+            "AGT",
+            "AHSG",
+            "ACY3",
+            "ANK3",
+            "ACYP1",
+            "AGBL5",
+            "AIFM3",
+            "COL11A1",
+            "DIP2C-AS1",
+            "ACVRL1",
+            "AKR1E2",
+            "CCDC62",
+            "SKOR2",
+            "PDGFRA",
+            "FLJ13224",
+            "ADGRF2P",
+            "FUOM",
+            "ALG11",
+            "PCK1",
+            "F13B",
+            "ANKRD30B",
+            "C8orf17",
+            "CD80",
+            "LOC646471",
+            "GRIK1",
+            "CYP46A1",
+            "PNPLA5",
+            "SCN8A",
+            "MIR1243",
+            "CRNN",
+            "HERC2P4",
+            "SNORD14B",
+            "CRIPTO3",
+            "NPHP3-AS1"
         ],
         "Coefficient": [
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+            -5.383744646657596,
+            5.10312086142474,
+            4.181755664859579,
+            -3.9830084576843134,
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output/regress/Obstructive_sleep_apnea/significant_genes_condition_Epilepsy.json CHANGED Viewed

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output/regress/Obstructive_sleep_apnea/significant_genes_condition_Fibromyalgia.json CHANGED Viewed

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-            "TMEM229A",
-            "MRPS31",
-            "CCL1",
-            "OR6N1",
-            "LYZL6",
-            "RPL23AP32",
-            "TAT",
-            "SPINK8",
-            "FMO1",
-            "HOMER3",
-            "EDA2R",
-            "PENK",
-            "PSD2",
-            "WEE2",
-            "ASPDH",
-            "CA14",
-            "ZNF695",
-            "ANKRD53",
-            "MYOC",
-            "AGRP",
-            "SRR",
-            "PLAC1",
-            "LINC00174",
-            "TEKT5",
-            "COLEC10",
-            "OR2F1",
-            "HTR3B",
-            "PCDH11Y",
-            "PAQR8",
-            "PRSS42P",
-            "TCERG1L",
-            "C10orf88",
-            "AGTR2",
-            "NOS3",
-            "ALG10B",
-            "RPP38-DT",
-            "RHAG",
-            "CLSTN3",
-            "GTSF1L",
-            "ZNF584",
-            "CELA2B",
-            "AKR1C8",
-            "THSD7B",
-            "LEPROTL1",
-            "ATP6V1C2",
-            "TCEAL7",
-            "TIGAR",
-            "TBX4",
-            "HSPA7",
-            "HRCT1",
-            "MND1",
-            "THRSP",
-            "POTEE",
-            "GPRC6A",
-            "HOXC9",
-            "ELANE",
-            "MMP9",
-            "ECHDC1",
-            "OR2T34",
-            "SMR3B",
-            "OR10Q1",
-            "CLDN25",
-            "CDY1B",
-            "OR1F2P",
-            "CXCL13",
-            "OR1E1",
-            "PRSS37",
-            "CCDC144BP",
-            "PRB4",
-            "FAM167B",
-            "INA",
-            "SLC17A3",
-            "FASTKD1",
-            "KIF17",
-            "CCDC14",
-            "SLC46A2",
-            "TMCO2",
-            "NR2E3",
-            "SLCO1C1",
-            "BMPR1B",
-            "FLJ13224",
-            "ATP1B1",
-            "GPR89B",
-            "FADS2",
-            "COL22A1",
-            "SLC35C1",
-            "MPL",
-            "KCNA5",
-            "HLA-DRB5",
-            "UMODL1-AS1",
-            "MLLT11",
-            "OVCH2",
-            "TMEM236",
-            "RFPL1S",
-            "TTC21A",
-            "THSD4",
-            "EFEMP1",
-            "OR52I1",
-            "PCDHGB2",
-            "PYY2",
-            "RNF8",
-            "KLHDC8A",
-            "PCDH8",
-            "CELA2A",
-            "DNAJB8",
-            "KCNS2",
-            "SEC14L3",
-            "DYNC2H1",
-            "TKTL1",
-            "FAM74A1",
-            "LINC00314",
-            "ADCY8",
-            "CDK14",
-            "DSCR8",
-            "DIPK1A",
-            "SPATA45",
-            "DDX51",
-            "ZNF677",
-            "CAMK2D",
-            "FAM43B",
-            "HTR2B",
-            "SI",
-            "KIR2DS4",
-            "HOXA7",
-            "CIB3",
-            "HBZ",
-            "DAZL",
-            "DPP6",
-            "TICAM1",
-            "APOB",
-            "WASHC2C",
-            "LINC01599",
-            "KIR3DL3",
-            "RORB",
-            "CDH10",
-            "MDGA1",
-            "IRAK1",
-            "KRT35",
-            "SPATS1",
-            "PACS1",
-            "DCT",
-            "ATP10A",
-            "PLA2G2C",
-            "INS",
-            "LBX2",
-            "TGM6",
-            "LOC145845",
-            "PCDHGA4",
-            "EXD1",
-            "COX10",
-            "OR51T1",
-            "C7orf33",
-            "PCDHB19P",
-            "FUCA2",
-            "DZIP1L",
-            "C2CD2",
-            "B3GNT9",
-            "CCL11",
-            "LRIF1",
-            "TNNI3K",
-            "MGLL",
-            "BTNL3",
-            "ADH4",
-            "GGA3",
-            "NEU1",
-            "ZNF322",
-            "NEFH",
-            "DPYSL4",
-            "TXNDC2",
-            "SNORA64",
-            "WHAMMP3",
-            "IQCF5",
-            "RNF126P1",
-            "EIF1",
-            "DLX1",
-            "IFNB1",
-            "COL2A1",
-            "KNCN",
-            "ABCA7",
-            "FRMPD2B",
-            "CYP4Z2P",
-            "ACTN3",
-            "ANKRD30BL",
-            "PRICKLE2",
-            "OR6C76",
-            "KLHDC7A",
-            "HAR1A",
-            "MARCKSL1",
-            "GABRB1",
-            "PDX1",
-            "ZNF705A",
-            "C3orf49",
-            "CYP2A6",
-            "LPGAT1",
-            "DNAJC25-GNG10",
-            "FRG2",
-            "CRYGS",
-            "MYC",
-            "CABS1",
-            "CCT8L2",
-            "GRIK4",
-            "FGFBP1",
-            "GTF2H2C",
-            "ASTL",
-            "NAP1L5",
-            "MTMR11",
-            "CCL22",
-            "FOXD4",
-            "PRY2",
-            "GARIN4",
-            "SCTR",
-            "FXYD4",
-            "TMPRSS11B",
-            "DRD5",
-            "RGS11",
-            "POTEM",
-            "AKR1D1",
-            "KCNN1",
-            "CRISP1",
-            "IGF2BP1",
-            "RAX",
-            "TUBBP5",
-            "OMP",
-            "TTC38",
-            "TDRD5",
-            "NUP210L",
-            "OR51E2",
-            "ACRV1",
-            "BST2",
-            "GRIN3B",
-            "PRG2",
-            "TRIM60",
-            "C17orf67",
-            "ZNF415",
-            "INS-IGF2",
-            "TMEM88",
-            "EFHB",
-            "SLC22A16",
-            "GOLGA8F",
-            "NUDT2",
-            "SMN1",
-            "CCR10",
-            "IL19",
-            "FADS3",
-            "KRTAP1-3",
-            "RNASE11",
-            "CSRNP1",
-            "DHX40P1",
-            "MEP1A",
-            "IL17C",
-            "NYAP2",
-            "UNC93A",
-            "OR7D4",
-            "LINC00200",
-            "OR56B1",
-            "FAM27C",
-            "OR2T8",
-            "SST",
-            "NPVF",
-            "TCP10L",
-            "SEC61A1",
-            "TMEM215",
-            "SLC36A4",
-            "OR9A4",
-            "TMPRSS11BNL",
-            "HFM1",
-            "CNMD",
-            "NANOG",
-            "PCDHB16",
-            "SNORA13",
-            "GLT6D1",
-            "KGD4",
-            "TBX3",
-            "FAM106C",
-            "TC2N",
-            "FAM111A",
-            "FHIP2B",
-            "SNORA5B",
-            "IFITM2",
-            "CDH24",
-            "HSD17B6",
-            "FGF20",
-            "ZNF295-AS1",
-            "IMPG1",
-            "STK26",
-            "FBXO9",
-            "CS",
-            "KRT4",
-            "EPHB2",
-            "SYT6",
-            "ANXA2P3",
-            "RAB3A",
-            "NMS",
-            "SNORA59B",
-            "KCNS1",
-            "LINC00301",
-            "DEGS1",
-            "SCARNA22",
-            "PRRT3",
-            "DAB1",
-            "HSD17B13",
-            "ACSBG2",
-            "RBM12B-AS1",
-            "DLEU7",
-            "MTNR1A",
-            "TBC1D26",
-            "LINC00293",
-            "PIWIL3",
-            "LINC02913",
-            "SNORA11",
-            "MFAP2",
-            "MYO3B",
-            "MAGEB10",
-            "SOCS3",
-            "ANKRD20A4P",
-            "APOBEC3B",
-            "TMEM132A",
-            "CHURC1",
-            "TNFRSF11B",
-            "FOXR2",
-            "DPYS",
-            "REDIC1",
-            "FMO3",
-            "TYW1B",
-            "GAGE10",
-            "ACOT6",
-            "RMST",
-            "EPOR",
-            "TMEM35A",
-            "HCRTR1",
-            "CST1",
-            "FBN2",
-            "SAG",
-            "ANKRD31",
-            "GP6",
-            "GRM5",
-            "UNC13C",
-            "LENEP",
-            "OPN4",
-            "CCDC183",
-            "FATE1",
-            "GPR150",
-            "GALNTL6",
-            "SNORA62",
-            "EAF2",
-            "HRH3",
-            "FST",
-            "SRPX",
-            "KLHL9",
-            "IL26",
-            "FRG1BP",
-            "HSPA1A",
-            "F9",
-            "SCARNA11",
-            "IQCH",
-            "GRIN1",
-            "IFNA17",
-            "GPR108",
-            "PDHA2",
-            "CITED1",
-            "KIF26B",
-            "TESK1",
-            "MUC5B",
-            "MCTP1",
-            "FAM41AY1",
-            "PCDHGB8P",
-            "LINC02716",
-            "RNASE3",
-            "TSHB",
-            "ZNF331",
-            "GJC1",
-            "GDF3",
-            "CRY2",
-            "CAAP1",
-            "OR1J1",
-            "ZNF707",
-            "ARHGAP36",
-            "CECR7",
-            "ZNF565",
-            "SLC30A8",
-            "OR2T10",
-            "KCNK17",
-            "SCGB1C1",
-            "MBD3L1",
-            "SLC6A8",
-            "BMPER",
-            "GPAT2",
-            "IFNA16",
-            "DPPA5",
-            "MANEAL",
-            "MBD2",
-            "CASP6",
-            "PXDNL",
-            "OR4C3",
-            "KLKB1",
-            "SNORA2A",
-            "BEX5",
-            "SYNGR4",
-            "TTTY6",
-            "SIGLECL1",
-            "FBXW12",
-            "BAALC",
-            "LINC01558",
-            "CCDC81",
-            "ZNF484",
-            "FAM181A-AS1",
-            "ZDHHC4",
-            "SPEM1",
-            "HAND2-AS1",
-            "CHI3L1",
-            "UGT3A1",
-            "ADGRE3",
-            "TMEM80",
-            "MOK",
-            "OR5M10",
-            "EIF3J",
-            "GLRA4",
-            "ZFAT-AS1",
-            "TPPP",
-            "SLC7A13",
-            "PIWIL2",
             "AZU1",
-            "TCL1B",
-            "GPS2",
-            "GNGT1",
-            "CATSPERD",
-            "OR2C1",
-            "SS18",
-            "NKX2-4",
-            "SPMIP2",
-            "TARS3"
         ],
         "Coefficient": [
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     },
     "cv_performance": {
         "prediction": {
-            "accuracy": 99.46902654867259,
-            "precision": 99.6133009527368,
-            "recall": 99.80952380952381,
-            "f1": 99.71001700267568
         },
         "selection": {
-            "precision": 1.2031308945288028,
-            "recall": 9.23076923076923,
-            "f1": 2.128774170345006,
-            "jaccard": 1.077617679195758
         }
     }
 }

 {
     "significant_genes": {
         "Variable": [
+            "ADAMTS2",
+            "ADCY10",
+            "ADAM30",
+            "ACSM4",
+            "APOL5",
+            "ABCA5",
+            "ADAM18",
             "APOF",
+            "ACOX2",
+            "PDYN",
+            "ABCC8",
+            "ACTR2",
+            "ADAM11",
+            "AFDN",
+            "CH25H",
+            "SERTAD4",
+            "ACSM1",
+            "LGALS13",
+            "ART4",
+            "FZD9",
+            "ACKR3",
+            "ACER3",
+            "FEZF2",
+            "AJM1",
+            "CLDN10",
+            "CABP7",
+            "SERTM1",
+            "ANTXRL",
+            "DIRC1",
+            "C9orf50",
+            "ADCYAP1R1",
+            "ADGRB1",
+            "BACH1",
+            "ADCY7",
+            "CD5L",
+            "ALS2",
+            "FSTL5",
+            "MS4A12",
+            "IGHV4OR15-8",
+            "ADAMTS6",
+            "ABCA9",
+            "AASS",
+            "EWSAT1",
+            "MAGEA9B",
+            "AKR7L",
+            "ARRDC3",
+            "AWAT1",
+            "MACC1",
+            "CST5",
+            "BCAS1",
+            "ANXA13",
+            "SPINK14",
+            "AASDH",
+            "USP31",
+            "SLC2A4",
+            "CAV3",
+            "CES4A",
+            "ALOX12",
+            "ARHGDIA",
+            "AGA",
+            "AGXT",
+            "ADAMTS8",
+            "GLB1L3",
+            "FKBP8",
+            "GSX1",
+            "FAM131B",
+            "GSTT4",
+            "CCDC12",
+            "MDFI",
+            "ADAM17",
+            "BPIFB4",
+            "AKR1E2",
+            "EMC2",
             "AZU1",
+            "FGF16",
+            "ANKDD1A",
+            "EMSY",
+            "AMER3",
+            "DNAJC17",
+            "ANGPTL1",
+            "CHST1",
+            "APOBEC4",
+            "ACAD11",
+            "ZNF19",
+            "DEFA4",
+            "CDHR1",
+            "ASB16-AS1",
+            "DNAJB9",
+            "GAL3ST3",
+            "CCL2",
+            "ABRAXAS2",
+            "CDHR2",
+            "DSCAML1",
+            "FOLR3",
+            "CLDN4",
+            "ARID1A",
+            "DNASE1L3",
+            "ACACB",
+            "ASIC5",
+            "CELA3A",
+            "AK2P2",
+            "FOS",
+            "ACSBG1",
+            "LRRTM1",
+            "ELOA3DP",
+            "DSC3",
+            "CLCNKB",
+            "ARFIP2",
+            "SNORD76",
+            "MIR558",
+            "ACVR2A",
+            "LOC400036",
+            "CRACD",
+            "AMFR",
+            "DUX5",
+            "BPESC1",
+            "AFF1",
+            "ABT1",
+            "ASIC4",
+            "TXNDC8",
+            "ERVK-6",
+            "TM2D1",
+            "WDR41",
+            "DSC1",
+            "LOC651337",
+            "ACSL5",
+            "ADAR",
+            "NAT8",
+            "DHRS4L1",
+            "RRH",
+            "FSD2",
+            "AGMO",
+            "FAM83E",
+            "CCRL2",
+            "ARMC9",
+            "ASB14",
+            "CIMIP5",
+            "CIART",
+            "ADGRF2P",
+            "CST9L",
+            "DAZ2",
+            "CITED4",
+            "DUSP1",
+            "ANKHD1",
+            "MIR33A",
+            "BRWD1",
+            "MEDAG",
+            "TMEM128",
+            "C1orf115",
+            "ADAM29",
+            "CPN2",
+            "FABP7",
+            "GOLGA8F",
+            "GSDMA",
+            "ADPGK",
+            "CEMIP",
+            "FLJ42627"
         ],
         "Coefficient": [
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         "Absolute Coefficient": [
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+            1.2704036004481756e-06
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     },
     "cv_performance": {
         "prediction": {
+            "nmse": 5.902419394905694,
+            "r_squared": -4.902419394905694
         },
         "selection": {
+            "precision": 0.49445146790279537,
+            "recall": 1.1538461538461537,
+            "f1": 0.6918624446714334,
+            "jaccard": 0.3492239467849224
         }
     }
 }

output/regress/Obstructive_sleep_apnea/significant_genes_condition_Gender.json CHANGED Viewed

@@ -1,366 +1,1102 @@
 {
     "significant_genes": {
         "Variable": [
-            "COL4A1",
-            "HTN3",
-            "OTC",
-            "ZIC2",
-            "ESM1",
-            "CIDEC",
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-            "ALG1L1P",
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-            "AIM2",
-            "HOXC9",
-            "FAM74A3",
-            "CHST2",
-            "CFAP46",
-            "PRB4",
-            "PLA2G2E",
-            "SLC35C1",
-            "NUCB2",
-            "NRG2",
-            "THRSP",
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-            "DIPK1A",
-            "FOXD2",
-            "KRT35",
-            "GRIN2D",
-            "IL22",
-            "E2F7",
-            "PARP12",
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-            "LINC01599",
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-            "TIMP4",
-            "CXCL13",
-            "CNR2",
-            "FAM167B",
-            "CCL11",
-            "MAP4K2",
             "ABCG1",
-            "GRAP",
-            "DNMT3B",
-            "LINC00314",
-            "POTEE",
-            "GARIN4",
-            "FRMPD2B",
-            "FERD3L",
-            "KRT32",
-            "HOXC8",
-            "GPRIN1",
-            "EAF2",
-            "KRTAP13-1",
-            "TMEM132A",
-            "C18orf54",
-            "HSD17B13",
-            "FAM43B",
-            "RHAG",
-            "CELSR3",
-            "SNX9",
-            "C17orf67",
-            "RMI2",
-            "CIMIP2B",
-            "SPINK8",
-            "SLC36A1",
-            "SLC17A3",
-            "SEC14L3",
-            "GTSF1L",
-            "EME1",
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-            "DLEU1",
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-            "H2AC11",
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-            "TREH",
-            "CDC25C",
-            "KCNQ1OT1",
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-            "SLC2A7",
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-            "ZNF707",
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-            "SI",
-            "SLC28A1",
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         }
     }
 }

 {
     "significant_genes": {
         "Variable": [
+            "AAK1",
+            "A4GALT",
+            "AATF",
+            "A1CF",
+            "ABCC6P2",
+            "ABCC6",
+            "ABCC13",
+            "AASS",
+            "A1BG-AS1",
+            "ABCC3",
+            "ABCB4",
+            "ACSM1",
+            "AAR2",
+            "ABCA6",
+            "AASDH",
+            "ABCA8",
+            "ABCD4",
+            "ACAN",
+            "ACSF3",
+            "ABCA7",
+            "ABO",
+            "AANAT",
+            "ACSM5",
+            "AADACL2",
+            "ABCB6",
+            "ABCC6P1",
+            "ACBD4",
+            "ABLIM3",
+            "ABCA12",
+            "ACOD1",
+            "ABTB3",
+            "ACSM4",
+            "ABCA5",
+            "ACP5",
+            "ABCA10",
+            "ABHD18",
+            "ABHD15",
+            "AATK",
+            "ABCB5",
+            "ACOX2",
+            "ABCA2",
+            "A1BG",
+            "ABHD2",
+            "A2ML1",
+            "ABL2",
+            "ACKR1",
+            "ACAP3",
+            "ADA",
+            "ABHD13",
+            "ADCY10",
+            "ABHD16B",
+            "ACOT12",
+            "ACAA1",
+            "ADAM30",
+            "ADAM22",
+            "ACOT6",
+            "ABHD4",
+            "AACS",
+            "ABCC11",
+            "ABI3",
+            "ABCC8",
+            "AACSP1",
+            "AADAT",
+            "ABCA9",
+            "ABT1",
+            "ACTL7A",
+            "ABHD14B",
+            "AAMDC",
+            "ACER3",
+            "AADACL3",
+            "ABCB8",
+            "ABTB1",
+            "AMFR",
+            "A3GALT2",
+            "ACOT9",
+            "ADAMTS2",
+            "ABTB2",
+            "AARS2",
+            "ABHD16A",
+            "ACER1",
+            "ACTR2",
+            "AADACL4",
+            "AAA1",
             "ABCG1",
+            "ACMSD",
+            "ABCG5",
+            "ADAM18",
+            "A4GNT",
+            "ACCS",
+            "ADAM28",
+            "ABCG4",
+            "ABCG8",
+            "ACSL5",
+            "ABHD17A",
+            "ABHD11",
+            "ACRV1",
+            "CABP7",
+            "ACHE",
+            "ABCA1",
+            "ACAP1",
+            "ACBD6",
+            "ACACB",
+            "ABHD17AP1",
+            "ACTL10",
+            "ADORA1",
+            "ABHD17B",
+            "ADAMTS19",
+            "ACAD11",
             "ADAM12",
+            "C11orf65",
+            "ADAMDEC1",
+            "CFHR5",
+            "ABCA4",
+            "AGTR2",
+            "ACTN4",
+            "AKR1C8",
+            "ABCC4",
+            "ACADS",
+            "ACBD5",
+            "ADAMTS14",
+            "AGAP10P",
+            "ACTR3",
+            "ADH1C",
+            "AGR3",
+            "ADAMTS5",
+            "ADGRA1",
+            "ADAMTS7",
+            "ADAMTSL2",
+            "ABCC5",
+            "ABI3BP",
+            "APBA1",
+            "ACTL6B",
+            "ADRB3",
+            "ALX4",
+            "ADAMTS3",
+            "ANXA10",
+            "ABI2",
+            "ADAM21P1",
+            "AARSD1",
+            "AAGAB",
+            "ABRACL",
+            "ADAMTSL3",
+            "ACSBG1",
+            "ADGRE4P",
+            "ANKRD29",
+            "ACAA2",
+            "ADRA1A",
+            "ADAM11",
+            "BBOX1",
+            "ABRA",
+            "ABHD8",
+            "C2CD4A",
+            "ACAP2",
+            "ANKRD45",
+            "AAAS",
+            "ALS2",
+            "ACVR1C",
+            "ANGPTL2",
+            "ACAT1",
+            "AGA",
+            "ADAM3A",
+            "APCS",
+            "ADAM32",
+            "ALDH8A1",
+            "AGBL2",
+            "ABHD5",
+            "ABCE1",
+            "ADAMTS15",
+            "ALKAL2",
+            "ADGRB2",
+            "ARHGEF28",
+            "CCL13",
+            "ACSS2",
+            "ABLIM2",
+            "PRY",
+            "ALG2",
+            "AKAP5",
+            "AARS1",
+            "CCDC116",
+            "AFP",
+            "ADGRL3",
+            "AMY1C",
+            "ABHD3",
+            "ACTG1",
+            "ADCYAP1R1",
+            "ABCD3",
+            "MAGEC3",
+            "CCDC81",
+            "USP17L5",
+            "FZD9",
+            "AGO2",
+            "ADAMTS10",
+            "ADCK1",
+            "CRACR2A",
+            "CHAC1",
+            "ACSM2B",
+            "ABCF2",
+            "ANKRD20A3P",
+            "PDYN",
+            "CFAP20DC",
+            "ACTR5",
+            "AKR1C1",
+            "ADAP2",
+            "AXDND1",
+            "ADARB1",
+            "ECSCR",
+            "ABCC1",
+            "C11orf16",
+            "ADGRA3",
+            "CYP2A7",
+            "ANTXRL",
+            "AJM1",
+            "APOF",
+            "ACKR4",
+            "IFNA17",
+            "ADRA2B",
+            "CCDC144NL",
+            "GLYATL1",
+            "SNCAIP",
+            "NDP",
+            "CATSPERE",
+            "AKR7L",
+            "SPRR2C",
+            "HEPN1",
+            "ANKRD20A2P",
+            "ADAMTSL5",
+            "CELA3B",
+            "TTC21B",
+            "ABHD14A",
+            "ADCY7",
+            "ACRBP",
+            "ADAMTSL1",
+            "DYNLT2",
+            "CARD14",
+            "ATP7B",
+            "LAMP3",
+            "ADAMTS13",
+            "ALX3",
+            "AKR1B15",
+            "CCL24",
+            "AMER3",
+            "BCL2L10",
+            "ABI1",
+            "ABCG2",
+            "CHRDL1",
+            "ABCF3",
+            "ANKRD1",
+            "ACD",
+            "ACAT2",
+            "ADARB2-AS1",
+            "CSTL1",
+            "HHCM",
+            "ADRA1D",
+            "BRD7P3",
+            "GALNT17",
+            "CCDC190",
+            "ACSS3",
+            "DCX",
+            "ADAMTS4",
+            "ACY3",
+            "ACE2",
+            "ADIPOQ",
+            "ARL3",
+            "ANKRD35",
+            "ARL13A",
+            "BHLHE41",
+            "IGF2BP2-AS1",
+            "BCAN",
+            "AAMP",
+            "ABHD10",
+            "CA14",
+            "MLNR",
+            "CDRT15",
+            "ADGRB3",
+            "RHOXF1",
+            "GLT6D1",
+            "ADH7",
+            "SPATA1",
+            "ACAD9",
+            "ANXA13",
+            "FTHL17",
+            "CLEC4M",
+            "ABCB1",
+            "C8orf17",
+            "ABRAXAS2",
+            "MIR340",
+            "AMPD1",
+            "NOVA1",
+            "BEST3",
+            "BTC",
+            "ADAP1",
+            "BAZ2A",
+            "CELP",
+            "DIP2C-AS1",
+            "GARNL3",
+            "LOC645188",
+            "NPS",
+            "AWAT1",
+            "ARMC2",
+            "CAGE1",
+            "CHRNA4",
+            "CLVS1",
+            "ACOT8",
+            "ANKRD30A",
+            "LOC402279",
+            "ACOXL",
+            "ADGRG4",
+            "ELOA2",
+            "CCK",
+            "OR51E1",
+            "C16orf82",
+            "C1QTNF7",
+            "ABCB11",
+            "LOC441644",
+            "KCNA6",
+            "CSAG3",
+            "BROX",
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+            "PCK1",
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+            "AXIN1",
+            "CLDN24",
+            "C8B",
+            "ZNF774",
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+            "MAP3K13",
+            "ACACA",
+            "CHRD",
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+            "LOC646471",
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+            "CARINH",
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         "Coefficient": [
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         "Absolute Coefficient": [
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output/regress/Obstructive_sleep_apnea/significant_genes_condition_Generalized_Anxiety_Disorder.json CHANGED Viewed

The diff for this file is too large to render. See raw diff

output/regress/Obstructive_sleep_apnea/significant_genes_condition_Substance_Use_Disorder.json CHANGED Viewed

@@ -1,402 +1,1195 @@
 {
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 {
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+            "AASS",
+            "ABCC13",
+            "ABCB4",
+            "ABCC3",
+            "ACSM1",
+            "AAR2",
+            "AANAT",
+            "ABCA6",
+            "ABCD4",
+            "ABCC6P1",
+            "ABCA8",
+            "ACAN",
+            "ACBD4",
+            "AASDH",
+            "ACSF3",
+            "A2ML1",
+            "ABCB6",
+            "ABHD15",
+            "ABCA7",
+            "ABLIM3",
+            "ACSM5",
+            "ACSM4",
+            "ABTB3",
+            "ABCA5",
+            "ABO",
+            "AATK",
+            "ACP5",
+            "ABCB5",
+            "ABHD18",
+            "ACAP3",
+            "ACOX2",
+            "ABCA12",
+            "ABCA2",
+            "A1BG",
+            "ACKR1",
+            "ACOD1",
+            "AADACL2",
+            "ABHD16B",
+            "ABHD2",
+            "ADA",
+            "ABCC11",
+            "ABCA10",
+            "ADCY10",
+            "ABHD13",
+            "AACSP1",
+            "ACOT12",
+            "A4GNT",
+            "AACS",
+            "ABCA9",
+            "ABI3",
+            "ABL2",
+            "ABT1",
+            "ADAM30",
+            "ABCC8",
+            "ACTL7A",
+            "ACER3",
+            "ABHD4",
+            "ADAM22",
+            "A3GALT2",
+            "ADAMTS2",
+            "ABHD14B",
+            "ACAA1",
             "ABCG1",
+            "AMFR",
+            "AAMDC",
+            "ABCB8",
+            "AADACL3",
+            "ABCG5",
+            "AADAT",
+            "ABCG8",
+            "ACMSD",
+            "ACOT6",
             "ABTB1",
+            "ABHD16A",
+            "AAA1",
+            "AARS2",
+            "AAGAB",
+            "ABTB2",
+            "ACOT9",
+            "ACTL6B",
+            "ADAMTS19",
+            "ACCS",
+            "ACTR2",
+            "ADAM28",
+            "ABCB11",
+            "ADAM18",
+            "ACAP1",
+            "ACHE",
+            "CABP7",
+            "ACER1",
+            "ACBD6",
+            "ADORA1",
+            "ADAM11",
+            "AKR1C8",
+            "ADAMTSL2",
+            "ACACB",
+            "ABI2",
+            "A2M",
+            "ACSL5",
+            "ADAM21P1",
+            "AGTR2",
+            "ABHD17B",
+            "ABHD17AP1",
+            "ABHD17A",
+            "C11orf65",
+            "CFHR5",
+            "AGR3",
+            "ACTL10",
+            "ACAD11",
+            "ACTN4",
+            "ADGRA1",
+            "ADRB3",
+            "ALKAL2",
+            "ADAM12",
+            "ABHD11",
+            "ABRACL",
+            "ABCF2",
+            "ACAA2",
+            "ADAMDEC1",
+            "ADAMTS14",
+            "ADAMTS5",
+            "ABCA13",
+            "AARS1",
+            "AGA",
+            "ADAMTSL3",
+            "AGAP10P",
+            "ABCC10",
+            "ACTR3",
+            "CCDC116",
+            "ACADS",
+            "BBOX1",
+            "ABCA1",
+            "ACSBG1",
+            "ACBD5",
+            "ADH1C",
+            "ADAMTS7",
+            "ADGRE4P",
+            "ADAM3A",
+            "ACSS2",
+            "C2CD4A",
+            "ACRV1",
+            "ABCC5",
+            "ABHD5",
+            "ANXA10",
+            "AADACL4",
+            "ABHD8",
+            "AAAS",
+            "ADAMTS3",
+            "ADAMTS15",
+            "ADAM32",
+            "APBA1",
+            "ABRA",
+            "ABCD3",
+            "AARSD1",
+            "APOF",
+            "AFG1L",
+            "ABCG2",
+            "ADCYAP1R1",
+            "ABLIM2",
+            "ACVR1C",
+            "ADRA1A",
+            "ALDH8A1",
+            "ABHD10",
+            "ABHD6",
+            "AXDND1",
+            "ALX4",
+            "ADGRL3",
+            "ANKRD45",
+            "ADAMTSL1",
+            "ACAP2",
+            "ADAMTS9",
+            "ANTXRL",
+            "AJM1",
+            "ABHD3",
+            "ADCY5",
+            "ALS2",
+            "ABI3BP",
+            "ABCG4",
+            "ARHGEF28",
+            "CFAP20DC",
+            "PRY",
+            "APCS",
+            "MAGEC3",
+            "AKR1C1",
+            "AFP",
+            "ADARB2-AS1",
+            "ABCA4",
+            "AGO2",
+            "ACAT1",
+            "ABHD1",
+            "CCDC81",
+            "ACE2",
+            "ADAP2",
+            "ABCE1",
+            "ACRBP",
+            "AMPD1",
+            "ADAMTS4",
+            "ADAMTS13",
+            "ECSCR",
+            "CELA3B",
+            "ANO3",
+            "CCL13",
+            "ACBD3",
+            "ANKRD20A2P",
+            "ATP6V1E1",
+            "CRACR2A",
+            "SNCAIP",
+            "FZD9",
+            "ADAMTS10",
+            "AMY1C",
+            "HHCM",
+            "CHAC1",
+            "ACSM3",
+            "ABRAXAS2",
+            "AKR7A2P1",
+            "ADA2",
+            "FTHL17",
+            "ABCD2",
+            "AKAP5",
+            "ATP7B",
+            "ADARB1",
+            "ADCY7",
+            "ADH7",
+            "AKR7L",
+            "ANKRD1",
+            "NOVA1",
+            "BRD7P3",
+            "ANKRD29",
+            "ANXA13",
+            "ACSM2B",
+            "ACTBL2",
+            "NDP",
+            "CYP2A7",
+            "CATSPERE",
+            "ADGRV1",
+            "HAMP",
+            "ARMC2",
+            "BCAN",
+            "MIRLET7C",
+            "PDYN",
+            "DYNLT2",
+            "DNASE1L3",
+            "ADRA2B",
+            "USP17L5",
+            "ARHGEF26",
+            "ALX3",
+            "CHRDL1",
+            "APBA2",
+            "HEPN1",
+            "ANKRD20A3P",
+            "AFAP1L2",
+            "NPS",
+            "ACAT2",
+            "AGPAT1",
+            "C9orf57",
+            "SPATA1",
+            "AGBL2",
+            "ABCC1",
+            "ACY3",
+            "ADCK1",
+            "CCDC144NL",
+            "GLYATL1",
+            "PON1",
+            "ADGRA3",
+            "DCX",
+            "ABAT",
+            "CSTL1",
+            "ARL11",
+            "RHOXF1",
+            "ACSS3",
+            "ACD",
+            "GLT6D1",
             "NPNT",
+            "CLDN24",
+            "ACVR1",
+            "CLVS1",
+            "CYP21A2",
+            "AKR1B15",
+            "ADCY1",
+            "AMER3",
+            "GARNL3",
+            "LOC645188",
+            "BCL2L10",
+            "ADAMTSL5",
+            "AGXT2",
+            "AGBL1",
+            "ASMTL-AS1",
+            "LAMP3",
+            "ABI1",
+            "BHLHE41",
+            "CHRNA4",
+            "CAPN13",
+            "ADGRB3",
+            "ATR",
+            "ATP6V1G2",
+            "CBLN2",
+            "ACTA2",
+            "ADCY9",
+            "BAALC",
+            "CNIH3",
+            "C1orf159",
+            "BAP1",
+            "ALPI",
+            "KCNH4",
+            "ADAM8",
+            "MIR340",
+            "ADAT1",
+            "BAZ2A",
+            "LOC441644",
+            "IFNA17",
+            "LGALS13",
+            "SPRR2C",
+            "APOBEC3C",
+            "CELP",
+            "C8orf17",
+            "ADGRA2",
+            "PCDHB7",
+            "ARL3",
+            "LOC646471",
+            "BSX",
+            "CARD14",
+            "ANKRD28",
+            "GCNT2P1",
+            "ANKRD35",
+            "KCNA6",
+            "FLRT1",
+            "BARHL1",
+            "GGT7",
+            "ZNF774",
+            "ACP3",
+            "GPX5",
+            "ARHGEF10",
+            "PCK1",
+            "ARMCX5",
+            "ART4",
+            "CCDC190",
+            "ALPG",
+            "ADGRG4",
+            "AJAP1",
+            "CCL24",
+            "ACOXL",
+            "ADI1",
+            "ADAM10",
+            "CDH3",
+            "TTC21B",
+            "LOC402279",
+            "ADGRB2",
+            "GARIN5B",
+            "C8A",
+            "CCDC57",
+            "ARL13A",
+            "AMPD2",
+            "ANO9",
+            "ADCK2",
+            "ACAD8",
+            "AFAP1L1",
+            "C1orf146",
+            "C17orf50",
+            "AK3",
+            "IGF2BP2-AS1",
+            "ADGRG6",
+            "C3AR1",
+            "C16orf82",
+            "CARINH",
+            "ALOX15",
+            "MAP3K13",
+            "AK9",
+            "APOBEC2",
+            "ACOT11",
+            "BLOC1S2",
+            "WNT16",
+            "C4orf51",
+            "CTNNA3",
+            "ATP10A",
+            "LINC00467",
+            "CDRT15",
+            "ACADL",
+            "ANOS1",
+            "CPA6",
+            "CYP17A1",
+            "PCSK1N",
+            "FRMD4A",
+            "ABCF3",
+            "MIR1276"
         ],
         "Coefficient": [
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output/regress/Osteoarthritis/significant_genes_condition_Age.json CHANGED Viewed

@@ -1,108 +1,855 @@
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-            "recall": 0.48309178743961356,
-            "f1": 0.8695980953160797,
-            "jaccard": 0.4366978779785625
         }
     }
 }

 {
     "significant_genes": {
         "Variable": [
+            "ZNF451",
+            "DSE",
+            "SIN3B",
+            "IRAK3",
+            "MYO5C",
+            "MRPL42P5",
+            "CAPZA1",
+            "RAB18",
+            "DALRD3",
+            "HUS1",
+            "HSPA6",
+            "SNORD55",
+            "FUT7",
+            "DCLRE1A",
+            "FXYD1",
+            "RPP14",
+            "LENG1",
+            "MYOM1",
+            "SETD9",
+            "HCG18",
+            "PIK3C2A",
+            "POLG2",
+            "SOS1",
+            "C1orf115",
+            "RPPH1",
+            "ALG1",
+            "TIPIN",
+            "FAM209A",
+            "ZNF627",
+            "TUBB6",
+            "AFAP1L2",
+            "NLRP7",
+            "ABCD3",
+            "SCARNA7",
+            "MRPS25",
+            "LIG4",
+            "NLRP1",
+            "FGF18",
+            "CYTOR",
+            "PANK4",
+            "ODAD3",
+            "HINT3",
+            "ZBTB6",
+            "SNORD80",
+            "USP46",
+            "AKAP7",
+            "FAM76A",
+            "CAMKK2",
+            "ARRB1",
+            "RNF122",
+            "PLCH2",
+            "TREML2",
+            "NDUFV3",
+            "ANKRD20A1",
+            "MSANTD2",
+            "SYTL3",
+            "GAB2",
+            "KBTBD3",
+            "GBP1",
+            "FBXO42",
+            "UBALD1",
+            "DIPK1B",
+            "CRHR1",
+            "TAF1A",
+            "XYLT1",
+            "DNASE1L3",
+            "SKA2",
+            "LIMS2",
+            "POLR3G",
+            "CORO2B",
+            "PLA2G2C",
+            "RIF1",
+            "ITGA11",
+            "SKI",
+            "ECE1",
+            "GSDMB",
+            "SGO2",
+            "ITGAX",
+            "ATP1B1",
+            "SYT17",
+            "PLXNC1",
+            "MYOM2",
+            "LGALS9B",
+            "CHAD",
+            "SDHAF4",
+            "EPHX2",
+            "ZNF333",
+            "CNTNAP2",
+            "CSGALNACT2",
+            "LNPEP",
+            "MTCH2",
+            "LILRA3",
+            "RAB6B",
+            "MSMP",
+            "USP37",
+            "ERCC6L2",
+            "ANXA4",
+            "ANKRD36",
+            "CLCN3",
+            "CTIF",
+            "GUSBP15",
+            "SNHG8",
+            "CPPED1",
+            "CXCL8",
+            "ISG15",
+            "ATF2",
+            "COX11",
+            "MTRF1L",
+            "LRP5",
+            "CDKAL1",
+            "C5",
+            "FAM234B",
+            "NXPH4",
+            "LILRB1",
+            "GP9",
+            "MORN2",
+            "CD9",
+            "SGK1",
+            "SGCB",
+            "NANOS1",
+            "CSNK2A2",
+            "PLXNA4",
+            "PMS1",
+            "PGGHG",
+            "SGK3",
+            "C2orf15",
+            "ABCA1",
+            "ADRB2",
+            "CCDC137",
+            "CA2",
+            "DIS3",
+            "THNSL1",
+            "ACAD11",
+            "DHCR24",
+            "CCL28",
+            "VNN2",
+            "MINPP1",
+            "ZNF324B",
+            "ACOT1",
+            "MBOAT1",
+            "BPTF",
+            "CCNT1",
+            "EFHB",
+            "PMS2CL",
+            "P3H1",
+            "SIPA1L1",
+            "MT1E",
+            "UBN2",
+            "ARRB2",
+            "DDX11",
+            "SPACA6",
+            "NAA30",
+            "NDUFAF1",
+            "ZNF681",
+            "EFHC1",
+            "SLC18B1",
+            "PIAS3",
+            "ABCA7",
+            "HMGN3",
+            "DIDO1",
+            "SCAMP2",
+            "CRTAP",
+            "UBE3D",
+            "TMEM165",
+            "MIER2",
+            "JOSD2",
+            "PHACTR2",
+            "GSTM1",
+            "HLA-C",
+            "IL12A",
+            "ESRRA",
+            "MSC",
+            "PSMD11",
+            "ZNF549",
+            "TOP3A",
+            "HOOK3",
+            "NUDT14",
+            "C10orf88",
+            "MIR877",
+            "RNF187",
+            "RFX3",
+            "CAMK2N1",
+            "VAV3",
+            "SUOX",
+            "RPL14",
+            "EGR2",
+            "GPA33",
+            "YES1",
+            "STX3",
+            "CEP72",
+            "SLF1",
+            "ZNF502",
+            "PABPC1L",
+            "ASAH1",
+            "TFAP4",
+            "P2RX1",
+            "CYP27A1",
+            "RNF144B",
+            "IFIT3",
+            "PUS7",
+            "FHL2",
+            "TMEM63A",
+            "ZC2HC1A",
+            "UGT2B7",
+            "HRH1",
+            "RANGRF",
+            "NDFIP2",
+            "MAFB",
+            "SLAIN2",
+            "LAMP5",
+            "CLMN",
+            "GALNT2",
+            "BCKDHA",
+            "AP2A1",
+            "IER2",
+            "NUDCD2",
+            "LIN7B",
+            "ZNF226",
+            "ITPRIPL2",
+            "BAGE5",
+            "DHRS7B",
+            "NLK",
+            "ZNF512B",
+            "UTRN",
+            "AGMAT",
+            "LYRM9",
+            "CCR9",
+            "ATL2",
+            "FYCO1",
+            "PIP4K2B",
+            "ATAD2",
+            "CC2D1A",
+            "GNLY",
+            "HOXB2",
+            "CCDC66",
+            "MFSD12",
+            "FBXO2",
+            "RAPGEFL1",
+            "SELENOH",
+            "RRP7A",
+            "CD6",
+            "KHDRBS3",
+            "RDH13",
+            "SNORA70B",
+            "CREB3L4",
+            "BIN2",
+            "CRB3",
+            "ADCK1",
+            "ULK3",
+            "SLC5A12",
+            "MATK",
+            "CCDC69",
+            "ABCC10",
+            "CCT6B",
+            "IFI44L",
+            "H4C8",
+            "TUBB7P",
+            "SNORA28",
+            "PRICKLE2",
+            "ID3",
+            "HOXA6",
+            "CDIN1",
+            "KLHL26",
+            "HNRNPL",
+            "SLC38A11",
+            "STX4",
+            "PALM2AKAP2",
+            "HTRA4",
+            "CACNA1S",
+            "IGF2BP1",
+            "JHY",
+            "NSUN5P1",
+            "AMY1A",
+            "HOOK1",
+            "RAVER2",
+            "PRKCA",
+            "KRI1"
         ],
         "Coefficient": [
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         ],
         "Absolute Coefficient": [
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output/regress/Osteoarthritis/significant_genes_condition_Arrhythmia.json CHANGED Viewed

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output/regress/Osteoarthritis/significant_genes_condition_Atherosclerosis.json CHANGED Viewed

The diff for this file is too large to render. See raw diff

output/regress/Osteoarthritis/significant_genes_condition_Atrial_Fibrillation.json CHANGED Viewed

@@ -2,89 +2,74 @@
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output/regress/Osteoarthritis/significant_genes_condition_Bipolar_disorder.json CHANGED Viewed

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output/regress/Osteoarthritis/significant_genes_condition_Breast_Cancer.json CHANGED Viewed

@@ -2,69 +2,63 @@
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output/regress/Osteoarthritis/significant_genes_condition_COVID-19.json CHANGED Viewed

The diff for this file is too large to render. See raw diff

output/regress/Osteoarthritis/significant_genes_condition_Chronic_kidney_disease.json CHANGED Viewed

@@ -2,74 +2,80 @@
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output/regress/Osteoarthritis/significant_genes_condition_Chronic_obstructive_pulmonary_disease_(COPD).json CHANGED Viewed

The diff for this file is too large to render. See raw diff

output/regress/Osteoarthritis/significant_genes_condition_Coronary_artery_disease.json CHANGED Viewed

@@ -3,79 +3,79 @@
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output/regress/Osteoarthritis/significant_genes_condition_Epilepsy.json CHANGED Viewed

The diff for this file is too large to render. See raw diff

output/regress/Osteoarthritis/significant_genes_condition_Gender.json CHANGED Viewed

@@ -1,75 +1,870 @@
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 {
     "significant_genes": {
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+            "ACAD11",
+            "PLXNC1",
+            "GP9",
+            "NANOS1",
+            "ITGAX",
+            "SCAMP2",
+            "USP37",
+            "SIPA1L1",
+            "THNSL1",
+            "PLXNA4",
+            "ZNF324B",
+            "RFX3",
+            "PMS2CL",
+            "RPL14",
+            "LILRA3",
+            "RIF1",
+            "SGK3",
+            "GUSBP15",
+            "ARRB2",
+            "ANKRD36",
+            "ERCC6L2",
+            "IFI44L",
+            "CD6",
+            "C10orf88",
+            "UBN2",
+            "ZNF549",
+            "ULK3",
+            "ZC2HC1A",
+            "TFAP4",
+            "CDKAL1",
+            "C2orf15",
+            "CCNT1",
+            "DIDO1",
+            "CCL28",
+            "SGK1",
+            "LGALS9B",
+            "MT1E",
+            "P3H1",
+            "UGT2B7",
+            "ARHGAP33",
+            "MAFB",
+            "EFHC1",
+            "SPACA6",
+            "CSNK2A2",
+            "CDIN1",
+            "PGGHG",
+            "CD9",
+            "RNF187",
+            "YES1",
+            "NUDCD2",
+            "VNN2",
+            "ABCA1",
+            "GSTM4",
+            "CEP19",
+            "JOSD2",
+            "FBXO2",
+            "MFSD12",
+            "IL12A",
+            "ATL2",
+            "PHACTR2",
+            "CLMN",
+            "BIN2",
+            "ARL17A",
+            "CA2",
+            "PIAS3",
+            "CRTAP",
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+            "BCKDHA",
+            "ID3",
+            "ADRB2",
+            "MBOAT1",
+            "PUS7",
+            "SRA1",
+            "CACNA1S",
+            "DIS3",
+            "AGMAT",
+            "ACOT1",
+            "FAM234B",
+            "ALDH1A1",
+            "HMGN3",
+            "SLAIN2",
+            "RANGRF",
+            "PMS1",
+            "KBTBD11",
+            "AP2A1",
+            "TMEM165",
+            "MORN2",
+            "CAMK2N1",
+            "HLA-C",
+            "FHL2",
+            "MIER2",
+            "TOP3A",
+            "ZNF681",
+            "ZNF226",
+            "BPTF",
+            "TMEM63A",
+            "IFIT3",
+            "RNF144B",
+            "MSC",
+            "CEP72",
+            "NLK",
+            "ZNF679",
+            "GALNT2",
+            "ABCA7",
+            "SLC18B1",
+            "RIMS3",
+            "CCNI2",
+            "HOXC13",
+            "PTGER4",
+            "GALE",
+            "WDR73",
+            "SUOX",
+            "LILRB1",
+            "METTL14",
+            "CCDC69",
+            "ATXN7L2",
+            "NDFIP2",
+            "RDH13",
+            "ASAH1",
+            "HOOK3",
+            "GSTM1",
+            "MBP",
+            "PGBD4",
+            "PKM",
+            "ITPRIPL2",
+            "CCT6B",
+            "ZNF512B",
+            "LYRM9",
+            "RAPGEFL1",
+            "BEND3",
+            "RAVER2",
+            "CCR9",
+            "NUDT14",
+            "MTHFD2L",
+            "SNRNP48",
+            "SELENOH",
+            "ZNF502",
+            "DDX11",
+            "UTRN",
+            "ZNF133",
+            "POLR2J4",
+            "ABCC10",
+            "HLA-DRB1",
+            "KIF16B",
+            "CYP27A1",
+            "SLF1",
+            "HOXA6",
+            "HNRNPL",
+            "YTHDC2",
+            "SLC5A12",
+            "LACTB2",
+            "PIP4K2B",
+            "P2RX1",
+            "ZDHHC13",
+            "MATK",
+            "SPINDOC",
+            "ADI1",
+            "LILRA4",
+            "MLLT3",
+            "CREB3L4",
+            "AMN1",
+            "HSDL1",
+            "HTRA4",
+            "PRICKLE2",
+            "SDK2",
+            "ESRRA",
+            "VIPR1",
+            "HLA-DQB1",
+            "LMNB1",
+            "AMY1A",
+            "PNRC1",
+            "TLR1",
+            "GRAMD2B",
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         ],
         "Coefficient": [
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         "Absolute Coefficient": [
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output/regress/Osteoarthritis/significant_genes_condition_Huntingtons_Disease.json CHANGED Viewed

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output/regress/Osteoarthritis/significant_genes_condition_Hypertension.json CHANGED Viewed

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output/regress/Osteoarthritis/significant_genes_condition_Insomnia.json CHANGED Viewed

@@ -8,62 +8,77 @@
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output/regress/Osteoarthritis/significant_genes_condition_Liver_Cancer.json CHANGED Viewed

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output/regress/Osteoarthritis/significant_genes_condition_Liver_cirrhosis.json CHANGED Viewed

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output/regress/Osteoarthritis/significant_genes_condition_Migraine.json CHANGED Viewed

@@ -4,72 +4,87 @@
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output/regress/Osteoarthritis/significant_genes_condition_Obsessive-Compulsive_Disorder.json ADDED Viewed

	@@ -0,0 +1,78 @@

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output/regress/Osteoarthritis/significant_genes_condition_Obstructive_sleep_apnea.json CHANGED Viewed

The diff for this file is too large to render. See raw diff

output/regress/Osteoarthritis/significant_genes_condition_Polycystic_Ovary_Syndrome.json CHANGED Viewed

@@ -2,80 +2,56 @@
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output/regress/Osteoarthritis/significant_genes_condition_Post-Traumatic_Stress_Disorder.json CHANGED Viewed

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output/regress/Osteoarthritis/significant_genes_condition_Psoriasis.json CHANGED Viewed

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 }

output/regress/Osteoarthritis/significant_genes_condition_Schizophrenia.json CHANGED Viewed

@@ -2,62 +2,77 @@
     "significant_genes": {
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 }

     "significant_genes": {
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 }

output/regress/Osteoarthritis/significant_genes_condition_Stroke.json CHANGED Viewed

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output/regress/Osteoarthritis/significant_genes_condition_Thyroid_Cancer.json CHANGED Viewed

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output/regress/Osteoarthritis/significant_genes_condition_Type_1_Diabetes.json CHANGED Viewed

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output/regress/Osteoarthritis/significant_genes_condition_Type_2_Diabetes.json CHANGED Viewed

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output/regress/Osteoporosis/significant_genes_condition_Age.json CHANGED Viewed

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output/regress/Osteoporosis/significant_genes_condition_Cervical_Cancer.json CHANGED Viewed

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output/regress/Osteoporosis/significant_genes_condition_Hypertension.json CHANGED Viewed

@@ -6,820 +6,817 @@
             "ABCA5",
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-            "CTRB1",
-            "KLHL4",
-            "ADNP2",
-            "ANGPT1",
-            "DESI2",
             "ACTN2",
             "FOLR3",
             "GPR87",
             "ALAS1",
-            "EEF1AKMT3",
             "ACADL",
-            "ALOX5",
-            "CPS1",
             "EBLN2",
-            "CD52",
-            "COL15A1",
-            "ANXA8",
-            "BGLAP",
             "DIO1",
             "ACAN",
-            "ADA",
-            "C9",
-            "KIZ",
-            "ABCG5",
-            "ASB1",
-            "AGPAT2",
-            "ATP1B4",
-            "C3orf36",
-            "DFFB",
-            "AADAC",
             "ABCB11",
-            "AIM2",
-            "SLFN12",
             "ABHD3",
-            "H4C8",
-            "ABL1",
             "ACR",
             "DDIT4",
-            "LAMB2",
             "ADAM17",
-            "ASGR2",
-            "BAIAP2L2",
-            "BARX1",
-            "ACAD10",
             "ABR",
             "ABI3BP",
-            "CCT3",
-            "AGFG2",
             "FAM120C",
-            "A4GALT",
             "CHD5",
-            "ART3",
             "AR",
-            "AVPR1A",
-            "CNTN5",
-            "ACACA",
-            "C3",
             "GLT8D2",
             "ADCY6",
             "CLCN6",
-            "ATXN7L3B",
             "CYP27A1",
-            "ADGRD2",
             "INSM1",
             "TEX12",
-            "ANKH",
-            "PCDH11X",
-            "CDKL5",
             "RND3",
-            "ACBD3",
             "ACTL6A",
             "ADAM29",
-            "ALS2CL",
-            "ABCC5",
-            "ADGRL4",
             "CTNNAL1",
-            "BAG4",
-            "AFF3",
-            "APCS",
-            "ATP2B4",
-            "ATG2B",
-            "CCN4",
-            "BBS4",
-            "NUBP2",
-            "APBB1IP",
-            "CPT1A",
-            "BTN2A2",
-            "ADAM11",
-            "EDA2R",
-            "ACSL1",
-            "EPCAM",
-            "DOK5",
-            "ARPC5L",
-            "ACSS3",
-            "CLUAP1",
-            "ASAP2",
             "PLEK",
-            "COQ9",
-            "RPE65",
             "FABP4",
-            "ALDH5A1",
-            "CA10",
-            "CCL8",
             "ABO",
-            "CHN1",
-            "DNAL4",
             "GPATCH2L",
-            "DRAM1",
-            "IK",
             "PHLDA3",
-            "ADCY10",
-            "ATG16L1",
-            "DNAAF1",
-            "CDS1",
-            "SREK1",
-            "AMBP",
-            "CLCNKB",
-            "ACTR1A",
-            "KIF5C",
-            "FDXR",
-            "ACSM3",
-            "PCDHB12",
-            "AVEN",
             "APOL3",
-            "ADAM21",
-            "CAP1",
-            "DDX6",
-            "SYCE1L",
-            "CDC42EP3",
-            "TECTA",
             "B4GALNT1",
-            "HSPA6",
-            "ZNF266",
             "GPR88",
-            "EMP2",
-            "FCAR",
-            "CISD1",
-            "GKN1",
-            "CHFR",
-            "CPNE6",
-            "MAP7",
-            "KRT18P50",
-            "HEXA-AS1",
             "MAGEA1",
-            "ASCL3",
-            "ARHGAP44",
             "MAGEA10",
             "CA5A",
-            "B3GALT4",
-            "TRPM1",
-            "PDE4DIP",
-            "KCTD7",
-            "ANTXR1",
-            "DVL1",
-            "ANKEF1",
-            "HTR3A",
-            "DNAAF11",
-            "COX20",
-            "ARHGAP45",
-            "ANKRD40",
-            "ADCY8",
-            "DKK2",
-            "EIF2B2",
-            "CASD1",
-            "ACAP2",
-            "HTR2C",
-            "ARL14",
-            "CMA1",
-            "APPL1",
-            "CCR7",
-            "CARD9",
             "BTN3A2",
-            "FRRS1L",
-            "ACSM5",
-            "FCGR2B",
-            "ARNT2",
-            "TMEM43",
-            "AKIP1",
-            "EDC4",
             "SPDYE2",
-            "LRRC49",
-            "CPNE1",
-            "CD68",
-            "HIRA",
-            "TADA2A",
-            "ATRNL1",
-            "ARHGAP8",
-            "SPATA20",
-            "GCDH",
-            "UNC45A",
             "KIFC1",
-            "ANKRD1",
-            "NELL2",
-            "IKZF3",
-            "CD8B",
-            "TNNT2",
-            "TAS2R13",
-            "LRRC14",
-            "ADGRF5",
-            "TSKS",
-            "LILRA3",
-            "ANKRD34C",
-            "GPATCH2",
             "SPECC1L",
-            "ALPK1",
             "IGHV5-78",
-            "IAPP",
-            "SOAT2",
-            "UNG",
-            "HIVEP2",
             "BRCA1",
-            "FBXL7",
-            "IPO8",
-            "GAGE2A",
-            "ITIH1",
-            "AOC3",
-            "SHC1P1",
-            "CLEC4M",
-            "CH25H",
-            "TCF7",
-            "BCL2L10",
-            "RBBP5",
-            "VPS37C",
             "AKAP5",
-            "RAB11FIP5",
-            "SAR1A",
-            "DAPK3",
-            "AKTIP",
-            "TBX10",
-            "LRP2BP",
-            "TP53I3",
-            "CPA1",
-            "ALKBH1",
-            "NOLC1",
-            "ZFHX3",
-            "CLEC4E",
-            "WSCD2",
             "BABAM2",
-            "CGRRF1",
             "FAM182B",
-            "ANXA8L1"
         ],
         "Coefficient": [
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-            0.002766017759700516,
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-            -0.0024755317270035,
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-            0.0017309942012188578,
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-            -0.0005974260259572148,
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-            -9.544376065020489e-07,
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-            -3.642919299551295e-18
         ],
         "Absolute Coefficient": [
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     },
     "cv_performance": {
         "prediction": {
-            "accuracy": 70.0,
-            "precision": 67.65584415584415,
-            "recall": 75.01515151515152,
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         },
         "selection": {
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-            "jaccard": 0.3489354195403438
         }
     }
 }

             "ABCA5",
             "AGFG1",
             "ABCD4",
             "ABCA7",
+            "ACTC1",
+            "BACH2",
             "ABCA12",
             "DNASE1L2",
+            "ANXA4",
+            "ACTN3",
+            "CTRB1",
             "ABCA6",
+            "ACAA2",
+            "ABCA1",
+            "ALOX5",
+            "AGA",
+            "DESI2",
             "ADGRL2",
             "AKT3",
+            "ANKRD36BP2",
+            "ACD",
+            "ARL4C",
             "ADORA3",
+            "AGBL3",
+            "ABCC6",
+            "AEN",
             "ACTN2",
+            "ANGPT1",
+            "ADNP2",
             "FOLR3",
+            "ADA",
             "GPR87",
+            "ATP1B4",
+            "COL15A1",
+            "KLHL4",
+            "BGLAP",
             "ALAS1",
+            "CD52",
             "ACADL",
+            "EEF1AKMT3",
             "EBLN2",
             "DIO1",
             "ACAN",
             "ABCB11",
+            "C3orf36",
+            "BARX1",
+            "ANXA8",
             "ABHD3",
+            "AGPAT2",
+            "ACAD10",
+            "CNTN5",
+            "DFFB",
+            "ASGR2",
+            "C9",
             "ACR",
+            "BAIAP2L2",
+            "ABL1",
+            "H4C8",
+            "SLFN12",
             "DDIT4",
             "ADAM17",
             "ABR",
+            "AVPR1A",
+            "ACACA",
+            "KIZ",
+            "ABCG5",
+            "ASB1",
+            "A4GALT",
             "ABI3BP",
+            "AIM2",
+            "AADAC",
+            "CYP26B1",
+            "ART3",
+            "ABCC5",
             "FAM120C",
             "CHD5",
+            "ATXN7L3B",
+            "LAMB2",
+            "ATG2B",
             "AR",
+            "ALDH5A1",
+            "APCS",
+            "ATP2B4",
             "GLT8D2",
+            "CCL8",
+            "DOK5",
+            "CCN4",
+            "APBB1IP",
             "ADCY6",
+            "APPL1",
             "CLCN6",
             "CYP27A1",
+            "BTN2A2",
+            "BAG4",
+            "C3",
             "INSM1",
+            "CLUAP1",
+            "CCT3",
+            "AGFG2",
+            "ACSL1",
+            "ASAP2",
+            "KRT18P50",
+            "ARSB",
+            "CHN1",
+            "HEXA-AS1",
             "TEX12",
             "RND3",
+            "PCDH11X",
+            "ADGRL4",
             "ACTL6A",
+            "ADCY10",
+            "CA10",
+            "CPNE6",
+            "EDA2R",
+            "CDC42EP3",
+            "CISD1",
+            "ADAM11",
             "ADAM29",
             "CTNNAL1",
+            "GKN1",
             "PLEK",
+            "ALS2CL",
+            "EPCAM",
+            "ADGRD2",
+            "ACBD3",
+            "COX20",
+            "SYCE1L",
+            "ARHGAP44",
+            "IFT88",
             "FABP4",
+            "NUBP2",
+            "PCDHB12",
+            "DDX6",
             "ABO",
+            "CDKL5",
             "GPATCH2L",
+            "ANKH",
+            "RPE65",
             "PHLDA3",
+            "ACSS3",
+            "AFF3",
             "APOL3",
+            "DNAL4",
+            "COQ9",
+            "IK",
+            "HTR2C",
+            "BRINP1",
             "B4GALNT1",
             "GPR88",
+            "TADA2A",
+            "EIF2B2",
+            "ALG12",
+            "PDE4DIP",
+            "CAP1",
+            "ANKEF1",
+            "GAGE2A",
+            "TNNT2",
             "MAGEA1",
+            "ADGRF5",
+            "FDXR",
+            "CPT1A",
+            "CDC37L1",
+            "EDC4",
+            "TECTA",
+            "ACSM3",
+            "AVEN",
             "MAGEA10",
+            "ACSM5",
+            "CDS1",
             "CA5A",
             "BTN3A2",
+            "ADCY8",
+            "CHFR",
+            "ATG16L1",
+            "BBS4",
             "SPDYE2",
+            "AMBP",
+            "FXYD7",
+            "ARPC5L",
+            "TRDN",
+            "AKIP1",
+            "FCGR2B",
+            "ARHGAP45",
+            "HTR3A",
+            "EMP2",
             "KIFC1",
             "SPECC1L",
+            "GCDH",
+            "ARL14",
+            "MAP7",
+            "ADAM21",
+            "CASD1",
+            "ATRNL1",
+            "ARNT2",
+            "HOXA2",
+            "BCL2",
             "IGHV5-78",
+            "SREK1",
+            "ZNF266",
+            "KIF5C",
+            "LRRC49",
+            "CCR7",
+            "KCTD7",
+            "KANK1",
+            "CLCNKB",
+            "ALPK1",
+            "ATP10B",
+            "ACAP2",
+            "NDN",
+            "ZFHX3",
+            "NEUROD4",
+            "CAMKV",
+            "ARID5B",
+            "ANKRD34C",
             "BRCA1",
+            "CD40",
             "AKAP5",
+            "TAS2R13",
             "BABAM2",
+            "RFWD3",
+            "ANKRD40",
+            "DRAM1",
+            "ASCL3",
+            "PGP",
+            "ANAPC1",
+            "ACTR1A",
+            "CAND2",
+            "ABL2",
+            "B3GALT4",
+            "COL13A1",
+            "DDX5",
+            "CEACAM21",
+            "ALPP",
             "FAM182B",
+            "SMARCD1",
+            "ZNF749",
+            "EEF1A1P42",
+            "ATP2B2",
+            "ALKBH1",
+            "RBBP5",
+            "MECR",
+            "NACA2",
+            "GNB3",
+            "LILRA3",
+            "ALDH8A1",
+            "KRT6A",
+            "SHC1P1",
+            "PFKM",
+            "DUOX1",
+            "CHRNA9",
+            "METTL13",
+            "DUSP7",
+            "CD68",
+            "ARHGAP26",
+            "FAM27B",
+            "MAP3K5",
+            "BRD3",
+            "BOLA1",
+            "ADAM7",
+            "GNAI1",
+            "CMA1",
+            "CRIPTO",
+            "ACOX2",
+            "GAGE2C"
         ],
         "Coefficient": [
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         "Absolute Coefficient": [
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     "cv_performance": {
         "prediction": {
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         "selection": {
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         }
     }
 }

output/regress/Osteoporosis/significant_genes_condition_Liver_Cancer.json CHANGED Viewed

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output/regress/Osteoporosis/significant_genes_condition_Obesity.json CHANGED Viewed

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output/regress/Osteoporosis/significant_genes_condition_Sarcoma.json ADDED Viewed

	@@ -0,0 +1,801 @@

+{
+    "significant_genes": {
+        "Variable": [
+            "ABCB7",
+            "AGFG1",
+            "ABCA5",
+            "ABCA11P",
+            "ABCD4",
+            "ABCA1",
+            "ANXA4",
+            "ADRB1",
+            "BACH2",
+            "ADORA3",
+            "AIM2",
+            "ACAA2",
+            "BGLAP",
+            "AKT3",
+            "ALOX5",
+            "FOLR3",
+            "ABCA12",
+            "ACTC1",
+            "ACTN2",
+            "ABCA7",
+            "AGA",
+            "DNASE1L2",
+            "CD52",
+            "ANGPT1",
+            "ARL4C",
+            "ANXA8",
+            "ADGRL2",
+            "ABCC6",
+            "ADCY6",
+            "ACD",
+            "ACAN",
+            "ACADL",
+            "DESI2",
+            "ACTR1A",
+            "C9",
+            "DDIT4",
+            "CTRB1",
+            "ABR",
+            "ACTN3",
+            "ATG2B",
+            "EEF1AKMT3",
+            "ABI3BP",
+            "EBLN2",
+            "AGFG2",
+            "AADAC",
+            "AEN",
+            "COL15A1",
+            "CPS1",
+            "ALDH5A1",
+            "ADAM17",
+            "ADNP2",
+            "SLFN12",
+            "GLT8D2",
+            "ANKRD36BP2",
+            "FAM120C",
+            "C3orf36",
+            "H4C8",
+            "ADA",
+            "AFG2B",
+            "NUBP2",
+            "CRMP1",
+            "ABCF3",
+            "DFFB",
+            "KLHL4",
+            "DIO1",
+            "LAMB2",
+            "ASB1",
+            "DCLRE1C",
+            "ACOT8",
+            "KIZ",
+            "PRKAB2",
+            "ANKH",
+            "CISD1",
+            "GPR87",
+            "ATXN3L",
+            "RND3",
+            "ACAP2",
+            "ANTXR1",
+            "BTN2A2",
+            "ATP1B4",
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+            "TADA2A",
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+            "ADGRL4",
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+            "BAIAP2L2",
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+            "BRINP1",
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+            "ADGRD2",
+            "ADAM29",
+            "ALS2CL",
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+            "RPL10A",
+            "ANKEF1",
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+            "SREK1",
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+            "ATXN7L3B",
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+            "RASAL1",
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+            "CA8",
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+            "ADORA1",
+            "B4GALNT1",
+            "APBB1IP",
+            "DDX6",
+            "FCAR",
+            "TSKS",
+            "B3GALT4",
+            "AMBP",
+            "DNAI7",
+            "PDE3A",
+            "UNC45A",
+            "ASCL3",
+            "PCDH11X",
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+            "AMACR",
+            "VPS37C",
+            "PGP",
+            "S100A9",
+            "ACBD3",
+            "AIFM1",
+            "ADAM7",
+            "PARP4",
+            "PRKX",
+            "UBBP2",
+            "SHC1P1",
+            "DKK2",
+            "MST1R",
+            "MAGEA10",
+            "BRAF",
+            "EEF1A1P42",
+            "AUNIP",
+            "ARHGAP44",
+            "CIDEA",
+            "IL22RA1",
+            "RPS27A",
+            "KLHL20",
+            "KCNV1",
+            "PLA2G4C",
+            "RPE65",
+            "C1D",
+            "FAM216A",
+            "MIR492",
+            "HSPA6",
+            "AGPAT4",
+            "SLC7A11",
+            "GAGE2A",
+            "FRRS1L",
+            "COX20",
+            "PRSS3P2",
+            "LGMN",
+            "H2AC18",
+            "LDB3",
+            "PACS1",
+            "LRRC49",
+            "CASD1",
+            "CORT",
+            "KNG1",
+            "SCUBE3",
+            "BABAM2",
+            "CDC42EP3",
+            "RFWD3",
+            "BTN3A2",
+            "MUL1",
+            "RC3H1",
+            "CLEC4M",
+            "SPECC1L",
+            "MAP3K5",
+            "ADCY7",
+            "AVEN",
+            "HBEGF",
+            "KLK8",
+            "TRIOBP",
+            "CTC1",
+            "MIR224",
+            "HIRA",
+            "ZNF268",
+            "ALG12",
+            "PCDHB12",
+            "KANK1",
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+            "CNPY2",
+            "NELL2",
+            "EPCAM",
+            "PKNOX1",
+            "IL21R",
+            "LILRA3",
+            "RAB11FIP5",
+            "ADGRF5",
+            "H2AC19",
+            "ANXA8L1",
+            "MIR452"
+        ],
+        "Coefficient": [
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+}

output/regress/Pancreatic_Cancer/significant_genes_condition_Age.json CHANGED Viewed

@@ -1,294 +1,93 @@
 {
     "significant_genes": {
         "Variable": [
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 {
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output/regress/Pancreatic_Cancer/significant_genes_condition_Gender.json CHANGED Viewed

@@ -1,975 +1,102 @@
 {
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 }

output/regress/Pancreatic_Cancer/significant_genes_condition_Hypertension.json CHANGED Viewed

@@ -2,617 +2,638 @@
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     },
     "cv_performance": {
         "prediction": {
             "accuracy": 79.16666666666666,
-            "precision": 82.84696296229578,
-            "recall": 82.60204936675525,
-            "f1": 81.75013638843426
         },
         "selection": {
-            "precision": 0.8681375853795306,
-            "recall": 1.818181818181818,
-            "f1": 1.175129674923714,
-            "jaccard": 0.5914536800929603
         }
     }
 }

     "significant_genes": {
         "Variable": [
             "ANGPTL7",
             "TUBB1",
+            "MIR1909",
             "IDI2-AS1",
             "TRIM51",
             "GHRL",
+            "SMIM12",
+            "MIR106A",
+            "XPR1",
             "HRH1",
             "RAPSN",
+            "OR8B1P",
+            "RNA5SP74",
+            "CACNA2D4",
             "OR8A1",
             "UGT2B28",
+            "RFXAP",
+            "CD5L",
+            "EP300",
             "MDS2",
+            "ALDH8A1",
             "PLAU",
+            "ANXA10",
+            "OR6Q1",
             "LRFN1",
+            "TSBP1",
+            "TP53I11",
+            "CCL7",
             "RAD21L1",
+            "PCDHB11",
             "KRTAP13-3",
+            "FADS1",
+            "FRMD7",
+            "GPR148",
             "METTL21EP",
+            "IKZF4",
+            "CASP2",
             "MRGPRX3",
+            "SP3",
+            "MMAB",
+            "GSTM1",
+            "MTA1",
             "OR4A16",
+            "RPS6P6",
+            "GOT1L1",
+            "APLNR",
+            "MIR146A",
+            "LRFN5",
             "NECAB1",
+            "MIR382",
             "OR4C46",
+            "OR11G2",
+            "SLC25A35",
+            "HNRNPA1P8",
+            "SMOC1",
+            "OR1N2",
+            "LINC01602",
+            "PFN4",
+            "OR1J1",
+            "RASL11A",
+            "RNA5SP269",
+            "CATSPER3",
+            "FBXO15",
+            "RHBDL1",
+            "HMOX1",
             "PRPS1L1",
+            "OR4H12P",
+            "GLUD2",
             "HCFC1R1",
+            "NANOGNB",
+            "CSN3",
             "PSMB3P2",
+            "SSU72P1",
             "RNU6-68P",
             "RNA5SP183",
+            "RNF187",
+            "COTL1P1",
             "PF4",
             "CCDC121",
+            "S100A11P2",
+            "LRIT3",
+            "AMTN",
+            "STAT1",
+            "DDX20",
+            "SSX7",
             "C10orf90",
+            "PNLDC1",
+            "OR10U1P",
+            "NEFL",
+            "ZNF233",
+            "OR5G3",
+            "INTS15",
+            "RPL7L1P4",
+            "CANT1",
+            "SPRR2D",
+            "GFRA3",
             "HSD3BP4",
+            "KLHL42",
+            "NHS",
+            "PEG10",
             "GDPD4",
+            "ARL13A",
+            "SPESP1",
+            "LYPD5",
+            "CRELD1",
             "HSBP1P2",
+            "INVS",
+            "ZNF619",
             "SNORA36C",
             "OR51A6P",
             "KLHL38",
+            "MIR100",
+            "MKNK2",
+            "C7orf33",
+            "CHI3L2",
+            "CFL1P3",
+            "RNA5SP340",
+            "RBM4B",
+            "RNA5SP68",
+            "FAM223A",
+            "PGA3",
+            "MIR153-2",
             "BOLA1",
+            "LDLRAP1",
+            "CIBAR1P1",
+            "OR51B6",
+            "GSTT2",
+            "SPARC",
+            "BOLL",
+            "HPR",
+            "CXCL14",
+            "DEFB118",
+            "MAGEE1",
             "EPHA7",
+            "HUS1",
+            "RGS2",
+            "ACTR5",
+            "ZNF829",
             "PCDH8",
+            "SCGB1D2",
+            "HMGN1P30",
+            "STX10",
+            "RPL13",
+            "LCE1B",
             "ATP6V1C2",
+            "VXN",
+            "RPL7L1P8",
             "MIR1908",
+            "TRPM8",
+            "OR6K4P",
+            "CARMN",
+            "SLC9A2",
+            "FAM149B1",
+            "ADGRG2",
+            "GBP7",
             "OR6B1",
+            "OR1S2",
             "ALX1",
+            "PITX1",
+            "PIN1",
+            "GNPTG",
+            "SURF6",
+            "CIDECP1",
+            "WFDC3",
+            "LHCGR",
+            "ANKRD34C",
+            "UNC50",
+            "SUMO1P1",
+            "SLC6A1",
+            "ZNF474",
+            "RNF31",
+            "POFUT1",
+            "YBX1P1",
+            "PAPSS2",
+            "IFI6",
+            "KCNB1",
+            "DKK3",
+            "NKAIN3",
             "NXPE2",
             "NOX5",
+            "IRF9",
+            "APOL5",
+            "DGKK",
+            "CHAC1",
+            "ANKRD35",
+            "CALY",
             "PLEKHF1",
+            "MIR143",
             "SNORD48",
+            "OR1L1",
+            "CREB3L4",
+            "SSU72L1",
+            "CEBPA-DT",
+            "C1orf216",
             "SNORD68",
+            "SUMF1",
+            "NPM1P8",
+            "SNORD37",
+            "SSU72L2",
+            "SSU72L3",
             "FAM223B",
+            "OR5G5P",
+            "SSU72L6",
+            "SSU72L4",
+            "SSU72L5"
         ],
         "Coefficient": [
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         "Absolute Coefficient": [
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     }
 }

output/regress/Pancreatic_Cancer/significant_genes_condition_Obesity.json CHANGED Viewed

@@ -1,588 +1,666 @@
 {
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     },
     "cv_performance": {
         "prediction": {
-            "accuracy": 79.16666666666666,
-            "precision": 82.5125661762861,
-            "recall": 82.63053939524528,
-            "f1": 81.65169842792734
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         "selection": {
-            "precision": 0.9985322632942151,
-            "recall": 2.0779220779220777,
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-            "jaccard": 0.679576257028255
         }
     }
 }

 {
     "significant_genes": {
         "Variable": [
             "TUBB1",
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             "ANGPTL7",
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             "PCDHB11",
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             "XPR1",
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             "MIR106A",
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+            "GPR148",
+            "FADS1",
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             "ANXA10",
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             "MRGPRX3",
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+            "SCGB1D2",
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+            "PCDHB9",
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             "OR4H12P",
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+            "GSTM1",
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+            "RAB39B",
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+            "PGC",
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+            "OR5G3",
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+            "KCNB1",
             "PSMB3P2",
             "IRF9",
+            "VSTM1",
+            "CARMN",
+            "OR7E22P",
+            "HPR",
+            "SIGLEC17P",
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+            "RPL7L1P8",
             "MIR1908",
+            "MYBPC1",
+            "YBX1P1",
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+            "CLCNKA",
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+            "SNORD32A",
+            "FCRL4",
+            "NOX5",
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+            "C7orf33",
+            "TIMELESS",
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+            "RNA5SP68",
+            "ACTR5",
+            "LRIT3",
             "WFDC3",
+            "PPBP",
+            "RPL7L1P4",
+            "ADGRG2",
+            "MIR143",
+            "OR1L1",
+            "TBCCD1",
+            "HIC2",
+            "HSD3BP4",
+            "RAB40AL",
+            "TKTL1",
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+            "SLC24A5",
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+            "RPL13AP2",
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         "Coefficient": [
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         "Absolute Coefficient": [
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